RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 PMS2P54278 862 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 ZP1P60852 638 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 MAMLD1Q13495 774 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 PRTGQ2VWP7 1150 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 LEXMQ3ZCV2 418 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 ZKSCAN2Q63HK3 967 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 CFAP161Q6P656 301 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 NCEH1Q6PIU2 408 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 FBXO46Q6PJ61 603 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-210ENST00000482158 QSOX2Q6ZRP7 698 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 COLCA1Q6ZS62 124 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 SLC35F3Q8IY50 421 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 NEK9Q8TD19 979 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 LPAR1Q92633 364 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 MMABQ96EY8 250 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-210ENST00000482158 VCPIP1Q96JH7 1222 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 NLRP4Q96MN2 994 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 GHITMQ9H3K2 345 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 MAGEE1Q9HCI5 957 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 ASAH2Q9NR71 780 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 SMYD2Q9NRG4 433 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 SEPT11Q9NVA2 429 aaKnown RBP5.91□□□□□ -1.46
SF3B1-210ENST00000482158 HAO1Q9UJM8 370 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 NFE2L3Q9Y4A8 694 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 BCAT2O15382 392 aaPredicted RBP5.9□□□□□ -1.46
SF3B1-210ENST00000482158 EIF2S1P05198 315 aaKnown RBP5.9□□□□□ -1.46
SF3B1-210ENST00000482158 HOXB5P09067 269 aa5.9□□□□□ -1.46
SF3B1-210ENST00000482158 NFKBIAP25963 317 aa5.9□□□□□ -1.46
SF3B1-210ENST00000482158 ARL3P36405 182 aa5.9□□□□□ -1.46
SF3B1-210ENST00000482158 COMPP49747 757 aaPredicted RBP5.9□□□□□ -1.46
SF3B1-210ENST00000482158 DRG2P55039 364 aaKnown RBP5.9□□□□□ -1.46
SF3B1-210ENST00000482158 ADORA2A-AS1P86434 159 aa5.9□□□□□ -1.46
SF3B1-210ENST00000482158 MYBPC2Q14324 1141 aa5.9□□□□□ -1.46
SF3B1-210ENST00000482158 FRG1Q14331 258 aaKnown RBP5.9□□□□□ -1.46
SF3B1-210ENST00000482158 MEA1Q16626 185 aa5.9□□□□□ -1.46
SF3B1-210ENST00000482158 CXorf66Q5JRM2 361 aaPredicted RBP5.9□□□□□ -1.46
SF3B1-210ENST00000482158 ITPRIPL1Q6GPH6 555 aa5.9□□□□□ -1.46
SF3B1-210ENST00000482158 LCTLQ6UWM7 567 aa5.9□□□□□ -1.46
SF3B1-210ENST00000482158 PATL1Q86TB9 770 aaKnown RBP5.9□□□□□ -1.46
SF3B1-210ENST00000482158 SFTPA2Q8IWL1 248 aa5.9□□□□□ -1.46
SF3B1-210ENST00000482158 ZCCHC9Q8N567 271 aaKnown RBP5.9□□□□□ -1.46
SF3B1-210ENST00000482158 FAM149B1Q96BN6 582 aa5.9□□□□□ -1.46
SF3B1-210ENST00000482158 CLK4Q9HAZ1 481 aaKnown RBP5.9□□□□□ -1.46
SF3B1-210ENST00000482158 PLAC1Q9HBJ0 212 aa5.9□□□□□ -1.46
SF3B1-210ENST00000482158 FBRSL1Q9HCM7 1045 aaKnown RBP5.9□□□□□ -1.46
SF3B1-210ENST00000482158 KRCC1Q9NPI7 259 aaPredicted RBP5.9□□□□□ -1.46
SF3B1-210ENST00000482158 CYSLTR2Q9NS75 346 aa5.9□□□□□ -1.46
SF3B1-210ENST00000482158 POT1Q9NUX5 634 aa5.9□□□□□ -1.46
SF3B1-210ENST00000482158 CORO1CQ9ULV4 474 aaPredicted RBP5.9□□□□□ -1.46
SF3B1-210ENST00000482158 A0A1W2PRG0 241 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 ANKRD18BA2A2Z9 1011 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 GFPT2O94808 682 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 SOX30O94993 753 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 CBSLP0DN79 551 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 RARGP13631 454 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 MYF6P23409 242 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 CBSP35520 551 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 ARF3P61204 181 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-210ENST00000482158 ARF1P84077 181 aaKnown RBP5.89□□□□□ -1.47
SF3B1-210ENST00000482158 PPATQ06203 517 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 OLIG2Q13516 323 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 GPR18Q14330 331 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 HNF4GQ14541 408 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 ARHGEF6Q15052 776 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 TWIST1Q15672 202 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 TCTN1Q2MV58 587 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 DPCR1Q3MIW9 517 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 SPATA1Q5VX52 437 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 ANKRD54Q6NXT1 300 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 TSSK4Q6SA08 328 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 IKBIPQ70UQ0 350 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 FASTKD5Q7L8L6 764 aaKnown RBP5.89□□□□□ -1.47
SF3B1-210ENST00000482158 MB21D2Q8IYB1 491 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-210ENST00000482158 WDTC1Q8N5D0 677 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 FRMD1Q8N878 549 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 NEXN-AS1Q8NBZ9 246 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 ARRDC2Q8TBH0 407 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 ARHGEF2Q92974 986 aaKnown RBP5.89□□□□□ -1.47
SF3B1-210ENST00000482158 VOPP1Q96AW1 172 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 FBXL8Q96CD0 374 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 GFM1Q96RP9 751 aaKnown RBP5.89□□□□□ -1.47
SF3B1-210ENST00000482158 C1QTNF5Q9BXJ0 243 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 SLC29A3Q9BZD2 475 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 KIF9Q9HAQ2 790 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 HCFC1R1Q9NWW0 138 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 UTYO14607 1347 aa5.89□□□□□ -1.47
SF3B1-210ENST00000482158 CKAP5Q14008 2032 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 FAM90A8PA6NJQ4 464 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 TTC36A6NLP5 189 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 EIF3CLB5ME19 914 aaKnown RBP5.88□□□□□ -1.47
SF3B1-210ENST00000482158 MS4A18H0YCH9 400 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 J3KR12 359 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 TOMM40O96008 361 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 MMP2P08253 660 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 FAM90A13PP0C7W8 464 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 FAM90A24PP0C7X0 464 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 HOXD13P35453 343 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 HADHAP40939 763 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 KRTAP1-1Q07627 177 aa5.88□□□□□ -1.47
SF3B1-210ENST00000482158 CSTF3Q12996 717 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms