RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 GIMD1P0DJR0 217 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 KRT10P13645 584 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 C6P13671 934 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 PECAM1P16284 738 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 MMP12P39900 470 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 MMP13P45452 471 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 CSNK1DP48730 415 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 LIG3P49916 1009 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 ZBTB17Q13105 803 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 ZNF235Q14590 738 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 PDK2Q15119 407 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 IRF4Q15306 451 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 WSCD2Q2TBF2 565 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 TMEM52BQ4KMG9 183 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 ZFYVE27Q5T4F4 411 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 TSPAN33Q86UF1 283 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 TEX26Q8N6G2 289 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 MAML1Q92585 1016 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 RAB7BQ96AH8 199 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 ZNF599Q96NL3 588 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 PANX2Q96RD6 677 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 DESI2Q9BSY9 194 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 SLC32A1Q9H598 525 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 ATP8A1Q9Y2Q0 1164 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 PCDHGB2Q9Y5G2 931 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 ALG6Q9Y672 507 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 EPN1Q9Y6I3 576 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 LRRK1Q38SD2 2015 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 ARID1BQ8NFD5 2236 aaPredicted RBP11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 KMT2BQ9UMN6 2715 aaPredicted RBP11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 K7ESM1 405 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 KCNK1O00180 336 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 NEBLO76041 1014 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 NDUFA10O95299 355 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 CELA2BP08218 269 aaPredicted RBP11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 PDHA1P08559 390 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 KRT7P08729 469 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 ALPIP09923 528 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 CTPS1P17812 591 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 LHCGRP22888 699 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 ARHGAP25P42331 645 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 RXRGP48443 463 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 PFN3P60673 137 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 RAD51Q06609 339 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 BCL2L1Q07817 233 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 NSUN2Q08J23 767 aaKnown RBP eCLIP11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 EIF2B5Q13144 721 aaKnown RBP11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 SGCGQ13326 291 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 RFTN1Q14699 578 aaPredicted RBP11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 SLC9A4Q6AI14 798 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 AADACL2Q6P093 401 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 KYAT3Q6YP21 454 aaKnown RBP11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 RHOT2Q8IXI1 618 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 RBFAQ8N0V3 343 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 CNTD1Q8N815 330 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 ARRDC2Q8TBH0 407 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 CXorf40AQ8TE69 158 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 PDCD6IPQ8WUM4 868 aaKnown RBP11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 ZNF641Q96N77 438 aaPredicted RBP11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 NUDCD1Q96RS6 583 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 TUBGCP5Q96RT8 1024 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 SEMA3CQ99985 751 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 SCNM1Q9BWG6 230 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 ATP13A3Q9H7F0 1226 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 C10orf88Q9H8K7 445 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 SCUBE2Q9NQ36 999 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 DONSONQ9NYP3 566 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 B4GALT6Q9UBX8 382 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 INTUQ9ULD6 942 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 HEY1Q9Y5J3 304 aa11.48□□□□□ -0.57
RAPGEF1-207ENST00000481260 NPIPB15A6NHN6 443 aaPredicted RBP11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 A6NNZ2 444 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 FFAR2O15552 330 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 FLRT2O43155 660 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 HTRA2O43464 458 aaPredicted RBP11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 SPOPO43791 374 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 TM7SF2O76062 418 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 PCCBP05166 539 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 ITGAVP06756 1048 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 MMP2P08253 660 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 XPAP23025 273 aaPredicted RBP11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 MSNP26038 577 aaKnown RBP11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 SERPINA4P29622 427 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 SERPINB6P35237 376 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 NUDT1P36639 197 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 CDKN2BP42772 138 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 AP1S1P61966 158 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 CCDC15Q0P6D6 951 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 PDE1CQ14123 709 aaPredicted RBP11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 TAZQ16635 292 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 SLC45A4Q5BKX6 768 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 MARC1Q5VT66 337 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 LIPIQ6XZB0 460 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 HSD11B1LQ7Z5J1 315 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 RAB44Q7Z6P3 723 aaPredicted RBP11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 IQCHQ86VS3 1027 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 RFX6Q8HWS3 928 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 TPCN2Q8NHX9 752 aa11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 PTCD2Q8WV60 388 aaKnown RBP11.47□□□□□ -0.57
RAPGEF1-207ENST00000481260 HAUS1Q96CS2 278 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms