RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 HCAR2Q8TDS4 363 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 TSACCQ96A04 125 aaPredicted RBP15.37■□□□□ 0.05
LIMS3-203ENST00000480744 ZNF653Q96CK0 615 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 ZNF641Q96N77 438 aaPredicted RBP15.37■□□□□ 0.05
LIMS3-203ENST00000480744 TUBGCP5Q96RT8 1024 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 UBL7Q96S82 380 aaPredicted RBP15.37■□□□□ 0.05
LIMS3-203ENST00000480744 CINPQ9BW66 212 aaPredicted RBP15.37■□□□□ 0.05
LIMS3-203ENST00000480744 BOCQ9BWV1 1114 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 TRIM7Q9C029 511 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 CLPBQ9H078 707 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 PRORYQ9H606 182 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 ATP13A3Q9H7F0 1226 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 POLR1BQ9H9Y6 1135 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 SIRPGQ9P1W8 387 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 MYO1AQ9UBC5 1043 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 GULP1Q9UBP9 304 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 ATP8A1Q9Y2Q0 1164 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 TMEM191CA6NGB0 347 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 SMTNL1A8MU46 457 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 EIF3CLB5ME19 914 aaKnown RBP15.36■□□□□ 0.05
LIMS3-203ENST00000480744 RIOK3O14730 519 aaKnown RBP15.36■□□□□ 0.05
LIMS3-203ENST00000480744 YY2O15391 372 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 FTLP02792 175 aaPredicted RBP15.36■□□□□ 0.05
LIMS3-203ENST00000480744 HTR1BP28222 390 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 SERPINA4P29622 427 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 MIPP30301 263 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 MMP12P39900 470 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 LSSP48449 732 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 BLKP51451 505 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 KLHL30Q0D2K2 578 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 INPP5AQ14642 412 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 NFATC4Q14934 902 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 E4F1Q66K89 784 aaPredicted RBP15.36■□□□□ 0.05
LIMS3-203ENST00000480744 ESRP1Q6NXG1 681 aaKnown RBP15.36■□□□□ 0.05
LIMS3-203ENST00000480744 FOXR1Q6PIV2 292 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 ENPP7Q6UWV6 458 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 RBM44Q6ZP01 1051 aaKnown RBP15.36■□□□□ 0.05
LIMS3-203ENST00000480744 ARHGAP36Q6ZRI8 547 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 ZNF571Q7Z3V5 609 aaPredicted RBP15.36■□□□□ 0.05
LIMS3-203ENST00000480744 SPACA3Q8IXA5 215 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 LSMEM2Q8N112 164 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 FSTL5Q8N475 847 aaPredicted RBP15.36■□□□□ 0.05
LIMS3-203ENST00000480744 NPWQ8N729 165 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 ZNF248Q8NDW4 579 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 TPCN2Q8NHX9 752 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 NAT6Q93015 286 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 ATXN7L3BQ96GX2 97 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 TBATAQ96M53 351 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 ZNF578Q96N58 590 aaPredicted RBP15.36■□□□□ 0.05
LIMS3-203ENST00000480744 EIF3CQ99613 913 aaKnown RBP15.36■□□□□ 0.05
LIMS3-203ENST00000480744 APOOQ9BUR5 198 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 PADI4Q9UM07 663 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 SATB2Q9UPW6 733 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 OR1A2Q9Y585 309 aa15.36■□□□□ 0.05
LIMS3-203ENST00000480744 BPTFQ12830 3046 aa15.35■□□□□ 0.05
LIMS3-203ENST00000480744 TMEM110-MUSTN1A8MSY1 372 aa15.35■□□□□ 0.05
LIMS3-203ENST00000480744 RASGRP1O95267 797 aa15.35■□□□□ 0.05
LIMS3-203ENST00000480744 SKILP12757 684 aa15.35■□□□□ 0.05
LIMS3-203ENST00000480744 PEX5P50542 639 aa15.35■□□□□ 0.05
LIMS3-203ENST00000480744 HK3P52790 923 aa15.35■□□□□ 0.05
LIMS3-203ENST00000480744 CXADRP78310 365 aa15.35■□□□□ 0.05
LIMS3-203ENST00000480744 TLE3Q04726 772 aa15.35■□□□□ 0.05
LIMS3-203ENST00000480744 BCL2L1Q07817 233 aa15.35■□□□□ 0.05
LIMS3-203ENST00000480744 ELOCQ15369 112 aa15.35■□□□□ 0.05
LIMS3-203ENST00000480744 ALG11Q2TAA5 492 aa15.35■□□□□ 0.05
LIMS3-203ENST00000480744 NYAP1Q6ZVC0 841 aa15.35■□□□□ 0.05
LIMS3-203ENST00000480744 ARHGAP12Q8IWW6 846 aa15.35■□□□□ 0.05
LIMS3-203ENST00000480744 PCDH19Q8TAB3 1148 aa15.35■□□□□ 0.05
LIMS3-203ENST00000480744 SCG3Q8WXD2 468 aaKnown RBP15.35■□□□□ 0.05
LIMS3-203ENST00000480744 CCDC3Q9BQI4 270 aa15.35■□□□□ 0.05
LIMS3-203ENST00000480744 BPIFA3Q9BQP9 254 aa15.35■□□□□ 0.05
LIMS3-203ENST00000480744 KLQ9UEF7 1012 aa15.35■□□□□ 0.05
LIMS3-203ENST00000480744 SCINQ9Y6U3 715 aa15.35■□□□□ 0.05
LIMS3-203ENST00000480744 A8MX80 341 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 DDX3XO00571 662 aaKnown RBP eCLIP15.34■□□□□ 0.05
LIMS3-203ENST00000480744 CASC3O15234 703 aaKnown RBP15.34■□□□□ 0.05
LIMS3-203ENST00000480744 LRCH4O75427 683 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 ALPIP09923 528 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 ELFN1P0C7U0 828 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 GZMAP12544 262 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 RBMS1P29558 406 aaKnown RBP15.34■□□□□ 0.05
LIMS3-203ENST00000480744 CSNK1DP48730 415 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 SCNN1BP51168 640 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 SRP54P61011 504 aaKnown RBP15.34■□□□□ 0.05
LIMS3-203ENST00000480744 IL10RBQ08334 325 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 AFMIDQ63HM1 303 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 CYP4V2Q6ZWL3 525 aaPredicted RBP15.34■□□□□ 0.05
LIMS3-203ENST00000480744 GPR155Q7Z3F1 870 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 TP53INP2Q8IXH6 220 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 KYQ8NBH2 561 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 ATL2Q8NHH9 583 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 WDR92Q96MX6 357 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 EDEM3Q9BZQ6 932 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 THSD1Q9NS62 852 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 AIPL1Q9NZN9 384 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 CWC15Q9P013 229 aaKnown RBP15.34■□□□□ 0.05
LIMS3-203ENST00000480744 GPR34Q9UPC5 381 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 ENTPD2Q9Y5L3 495 aa15.34■□□□□ 0.05
LIMS3-203ENST00000480744 A0A1W2PQC6 194 aa15.33■□□□□ 0.04
LIMS3-203ENST00000480744 H3BRJ5 948 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms