RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 ZNF185O15231 689 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 MATN3O15232 486 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 MID1O15344 667 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 PCDHGA12O60330 932 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 RNASEH1O60930 286 aaKnown RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 SEMA4FO95754 770 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 IGSF6O95976 241 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 JCHAINP01591 159 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 FGGP02679 453 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 DNTTP04053 509 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 CTSLP07711 333 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 CCNB1P14635 433 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 CHRNA3P32297 505 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 MMP13P45452 471 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 GRIA4P48058 902 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 VASPP50552 380 aaPredicted RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 SCNN1BP51168 640 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 CCNHP51946 323 aaPredicted RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 METAP1P53582 386 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 EIF3EP60228 445 aaKnown RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 SNRPD1P62314 119 aaKnown RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 CYP4F3Q08477 520 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 PPIDQ08752 370 aaKnown RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 ZBTB17Q13105 803 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 SNX1Q13596 522 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 ELAVL3Q14576 367 aaKnown RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 NOMO1Q15155 1222 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 SMAD1Q15797 465 aaKnown RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 LONRF2Q1L5Z9 754 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 MYLK3Q32MK0 819 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 HS1BP3Q53T59 392 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 INO80DQ53TQ3 878 aaPredicted RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 ARSIQ5FYB1 569 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 PRAMEF14Q5SWL7 426 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 MARC1Q5VT66 337 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 ZNF776Q68DI1 518 aaPredicted RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 TIGD7Q6NT04 549 aaPredicted RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 DARS2Q6PI48 645 aaKnown RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 BZW1Q7L1Q6 419 aaKnown RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 LRRC49Q8IUZ0 686 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 PGBD5Q8N414 524 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 OR2AP1Q8NGE2 309 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 PIP4K2CQ8TBX8 421 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 GANCQ8TET4 914 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 COG1Q8WTW3 980 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 TFB1MQ8WVM0 346 aaKnown RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 C1orf54Q8WWF1 131 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 CASKIN2Q8WXE0 1202 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 ATG4AQ8WYN0 398 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 ISG20Q96AZ6 181 aaKnown RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 HDAC11Q96DB2 347 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 CCDC114Q96M63 670 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 C16orf45Q96MC5 204 aaPredicted RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 GDAP1L1Q96MZ0 367 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 ZNF599Q96NL3 588 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 TSGA13Q96PP4 275 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 OSBPL9Q96SU4 736 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 NAPGQ99747 312 aaPredicted RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 HEPHQ9BQS7 1158 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 RSPH9Q9H1X1 276 aaPredicted RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 SCUBE2Q9NQ36 999 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 RBM22Q9NW64 420 aaKnown RBP eCLIP9.16□□□□□ -0.94
VCP-206ENST00000480327 SEPT3Q9UH03 358 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 IL36AQ9UHA7 158 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 SARDHQ9UL12 918 aa9.16□□□□□ -0.94
VCP-206ENST00000480327 FARP1Q9Y4F1 1045 aaPredicted RBP9.16□□□□□ -0.94
VCP-206ENST00000480327 CTAGE9A4FU28 777 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 F5H423 210 aaPredicted RBP9.15□□□□□ -0.94
VCP-206ENST00000480327 KPNA3O00505 521 aaPredicted RBP9.15□□□□□ -0.94
VCP-206ENST00000480327 MCF2LO15068 1137 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 FANCGO15287 622 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 LEFTY1O75610 366 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 FSBPO95073 299 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 PIGNO95427 931 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 GSRP00390 522 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 HLA-DQB2P05538 268 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 RBP3P10745 1247 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 CD27P26842 260 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 RBL1P28749 1068 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 CASQ1P31415 396 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 SLC8A1P32418 973 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 RENBPP51606 427 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 KLF1Q13351 362 aaPredicted RBP9.15□□□□□ -0.94
VCP-206ENST00000480327 RFTN1Q14699 578 aaPredicted RBP9.15□□□□□ -0.94
VCP-206ENST00000480327 PRKD1Q15139 912 aaPredicted RBP9.15□□□□□ -0.94
VCP-206ENST00000480327 CST6Q15828 149 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 SLC45A4Q5BKX6 768 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 DHRS13Q6UX07 377 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 SYT10Q6XYQ8 523 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 SRLQ86TD4 932 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 BBS5Q8N3I7 341 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 UBE2Q2Q8WVN8 375 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 MAML1Q92585 1016 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 LRIG1Q96JA1 1093 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 PBKQ96KB5 322 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 CAPZA3Q96KX2 299 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 SLC6A18Q96N87 628 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 AGAP3Q96P47 875 aa9.15□□□□□ -0.94
VCP-206ENST00000480327 QKIQ96PU8 341 aaKnown RBP eCLIP9.15□□□□□ -0.94
VCP-206ENST00000480327 CDC6Q99741 560 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms