RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	KLF15	Q9UIH9	416 aa		15.79	■□□□□ 0.12
HDLBP-238	ENST00000479894	PADI4	Q9UM07	663 aa		15.79	■□□□□ 0.12
HDLBP-238	ENST00000479894	RP1L1	Q8IWN7	2480 aa	Predicted RBP	15.79	■□□□□ 0.12
HDLBP-238	ENST00000479894	TCRBV5S1A1T	A0A578	114 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	TMEM191C	A6NGB0	347 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894		D6RAR5	112 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	LMO7DN	F2Z398	122 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894		M0QYT0	321 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	GRAP2	O75791	330 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	PCDH8	O95206	1070 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	FYN	P06241	537 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	CCDC175	P0C221	793 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	RFC1	P35251	1148 aa	Predicted RBP	15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	AIF1	P55008	147 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	KCNAB2	Q13303	367 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	TAF5	Q15542	800 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	BRMS1L	Q5PSV4	323 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	TTC39B	Q5VTQ0	682 aa	Predicted RBP	15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	SYPL2	Q5VXT5	272 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	SEL1L3	Q68CR1	1132 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	KIAA1161	Q6NSJ0	714 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	ESRP1	Q6NXG1	681 aa	Known RBP	15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	BORA	Q6PGQ7	559 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894		Q6ZVU0	165 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	VASH2	Q86V25	355 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	TMEM139	Q8IV31	216 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	SH2D3C	Q8N5H7	860 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	ATP6V0D2	Q8N8Y2	350 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	RXFP2	Q8WXD0	754 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	CCDC114	Q96M63	670 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	GFM1	Q96RP9	751 aa	Known RBP	15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	NPY6R	Q99463	290 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	NUP85	Q9BW27	656 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	SLC17A9	Q9BYT1	436 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	B3GNT4	Q9C0J1	378 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	SYNDIG1	Q9H7V2	258 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	DYRK4	Q9NR20	520 aa		15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	IPO11	Q9UI26	975 aa	Known RBP	15.78	■□□□□ 0.12
HDLBP-238	ENST00000479894	TCAF2	A6NFQ2	919 aa		15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	BTNL10	A8MVZ5	291 aa		15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	CASC3	O15234	703 aa	Known RBP	15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	CCP110	O43303	1012 aa		15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	CTSL	P07711	333 aa		15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	WT1	P19544	449 aa	Predicted RBP	15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	TACR2	P21452	398 aa		15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	PSMA2	P25787	234 aa		15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	SULT1E1	P49888	294 aa		15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	VAV2	P52735	878 aa		15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	RPS21	P63220	83 aa	Known RBP	15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	CYP4F2	P78329	520 aa		15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	DEUP1	Q05D60	604 aa		15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	PDE1C	Q14123	709 aa	Predicted RBP	15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	RAD9B	Q6WBX8	426 aa		15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	ERN2	Q76MJ5	926 aa	Known RBP	15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	CHSY1	Q86X52	802 aa		15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	CCAR2	Q8N163	923 aa	Known RBP	15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	ALG14	Q96F25	216 aa		15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	BTN2A3P	Q96KV6	586 aa		15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	LENG8	Q96PV6	779 aa	Predicted RBP	15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	HDAC8	Q9BY41	377 aa		15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894	PISD	Q9UG56	409 aa		15.77	■□□□□ 0.12
HDLBP-238	ENST00000479894		F5H5T6	163 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	KPNA3	O00505	521 aa	Predicted RBP	15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	ZSCAN12	O43309	604 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	KRT86	O43790	486 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	MTA2	O94776	668 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	ENDOD1	O94919	500 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	MOCS2	O96007	188 aa	Predicted RBP	15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	IGLV3-25	P01717	112 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	PRNP	P04156	253 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	ANXA6	P08133	673 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	HGF	P14210	728 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	CHRNA3	P32297	505 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	FLT3	P36888	993 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	NOP2	P46087	812 aa	Known RBP	15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	POLE2	P56282	527 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	EIF2B5	Q13144	721 aa	Known RBP	15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	RAP1GAP2	Q684P5	730 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	CXorf57	Q6NSI4	855 aa	Known RBP	15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	PHLDB2	Q86SQ0	1253 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	TAC4	Q86UU9	113 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	SLC35G2	Q8TBE7	412 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	CENPI	Q92674	756 aa	Predicted RBP	15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	SLC12A9	Q9BXP2	914 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	WDCP	Q9H6R7	721 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	PLEKHB1	Q9UF11	243 aa	Predicted RBP	15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	APOBEC3B	Q9UH17	382 aa	Known RBP	15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	XPO7	Q9UIA9	1087 aa	Known RBP	15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	ANAPC7	Q9UJX3	599 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	HS3ST2	Q9Y278	367 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	LOXL2	Q9Y4K0	774 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	CENPE	Q02224	2701 aa		15.76	■□□□□ 0.11
HDLBP-238	ENST00000479894	PRAMEF33	A0A0G2JMD5	474 aa		15.75	■□□□□ 0.11
HDLBP-238	ENST00000479894	FAM170A	A1A519	330 aa		15.75	■□□□□ 0.11
HDLBP-238	ENST00000479894	FPGT	O14772	594 aa		15.75	■□□□□ 0.11
HDLBP-238	ENST00000479894	PJA2	O43164	708 aa		15.75	■□□□□ 0.11
HDLBP-238	ENST00000479894	PRAMEF10	O60809	474 aa		15.75	■□□□□ 0.11
HDLBP-238	ENST00000479894	GCAT	O75600	419 aa		15.75	■□□□□ 0.11
HDLBP-238	ENST00000479894	PCK1	P35558	622 aa		15.75	■□□□□ 0.11

Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms