RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	OR2A12	Q8NGT7	310 aa		11.29	□□□□□ -0.6
APTX-223	ENST00000479656	CSGALNACT1	Q8TDX6	532 aa		11.29	□□□□□ -0.6
APTX-223	ENST00000479656	PTCD2	Q8WV60	388 aa	Known RBP	11.29	□□□□□ -0.6
APTX-223	ENST00000479656	DCAKD	Q8WVC6	231 aa		11.29	□□□□□ -0.6
APTX-223	ENST00000479656	CERS2	Q96G23	380 aa		11.29	□□□□□ -0.6
APTX-223	ENST00000479656	GUCD1	Q96NT3	240 aa		11.29	□□□□□ -0.6
APTX-223	ENST00000479656	DHRS4	Q9BTZ2	278 aa		11.29	□□□□□ -0.6
APTX-223	ENST00000479656	ZDHHC6	Q9H6R6	413 aa		11.29	□□□□□ -0.6
APTX-223	ENST00000479656	ATP13A3	Q9H7F0	1226 aa		11.29	□□□□□ -0.6
APTX-223	ENST00000479656	UGT1A7	Q9HAW7	530 aa		11.29	□□□□□ -0.6
APTX-223	ENST00000479656	UGT1A10	Q9HAW8	530 aa		11.29	□□□□□ -0.6
APTX-223	ENST00000479656	UGT1A8	Q9HAW9	530 aa		11.29	□□□□□ -0.6
APTX-223	ENST00000479656	MRM3	Q9HC36	420 aa	Known RBP	11.29	□□□□□ -0.6
APTX-223	ENST00000479656	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.29	□□□□□ -0.6
APTX-223	ENST00000479656	EURL	Q9NYK6	297 aa		11.29	□□□□□ -0.6
APTX-223	ENST00000479656	SLC17A6	Q9P2U8	582 aa		11.29	□□□□□ -0.6
APTX-223	ENST00000479656	PRKAG3	Q9UGI9	489 aa		11.29	□□□□□ -0.6
APTX-223	ENST00000479656	FETUB	Q9UGM5	382 aa		11.29	□□□□□ -0.6
APTX-223	ENST00000479656	SLC8A2	Q9UPR5	921 aa		11.29	□□□□□ -0.6
APTX-223	ENST00000479656	SPO11	Q9Y5K1	396 aa		11.29	□□□□□ -0.6
APTX-223	ENST00000479656	GOLGA8T	H3BQL2	631 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	AURKA	O14965	403 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	POLR3G	O15318	223 aa	Predicted RBP	11.28	□□□□□ -0.6
APTX-223	ENST00000479656	HTRA2	O43464	458 aa	Predicted RBP	11.28	□□□□□ -0.6
APTX-223	ENST00000479656	LDB2	O43679	373 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	BUD23	O43709	281 aa	Known RBP	11.28	□□□□□ -0.6
APTX-223	ENST00000479656	KAT7	O95251	611 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	PGLS	O95336	258 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	CTPS1	P17812	591 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	ABL2	P42684	1182 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	RECQL	P46063	649 aa	Predicted RBP	11.28	□□□□□ -0.6
APTX-223	ENST00000479656	VASP	P50552	380 aa	Predicted RBP	11.28	□□□□□ -0.6
APTX-223	ENST00000479656	GALK1	P51570	392 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	EPHB1	P54762	984 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	MAGOH	P61326	146 aa	Known RBP	11.28	□□□□□ -0.6
APTX-223	ENST00000479656	MGAT5	Q09328	741 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	PTPRCAP	Q14761	206 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	TMED2	Q15363	201 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	TSTD2	Q5T7W7	516 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	ADGRD1	Q6QNK2	874 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	MICALCL	Q6ZW33	695 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	PLPP6	Q8IY26	295 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	DEFB123	Q8N688	67 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	PAF1	Q8N7H5	531 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	MDGA1	Q8NFP4	955 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	BRSK1	Q8TDC3	778 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	PIH1D2	Q8WWB5	315 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	SLC44A1	Q8WWI5	657 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	PTPRN2	Q92932	1015 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	HLA-C	Q95604	372 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	CPEB1	Q9BZB8	566 aa	Known RBP	11.28	□□□□□ -0.6
APTX-223	ENST00000479656	KCNK12	Q9HB15	430 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	TREX1	Q9NSU2	369 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
APTX-223	ENST00000479656	ARL5A	Q9Y689	179 aa		11.28	□□□□□ -0.6
APTX-223	ENST00000479656		A0A0U1RQS6	177 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	MROH6	A6NGR9	719 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	11.27	□□□□□ -0.6
APTX-223	ENST00000479656	HMGB1P1	B2RPK0	211 aa	Predicted RBP	11.27	□□□□□ -0.6
APTX-223	ENST00000479656	VAPB	O95292	243 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	INHBA	P08476	426 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	SERPINA4	P29622	427 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	EIF2D	P41214	584 aa	Known RBP	11.27	□□□□□ -0.6
APTX-223	ENST00000479656	RAD51	Q06609	339 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	ZNF234	Q14588	700 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	EIF4H	Q15056	248 aa	Known RBP	11.27	□□□□□ -0.6
APTX-223	ENST00000479656	FNDC3B	Q53EP0	1204 aa	Known RBP	11.27	□□□□□ -0.6
APTX-223	ENST00000479656	HSP90AA5P	Q58FG0	334 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	TNFAIP8L3	Q5GJ75	292 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	EMC10	Q5UCC4	262 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	KCNMB4	Q86W47	210 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	SLC26A11	Q86WA9	606 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	ZSWIM9	Q86XI8	627 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	RIBC1	Q8N443	379 aa	Predicted RBP	11.27	□□□□□ -0.6
APTX-223	ENST00000479656	SLC44A3	Q8N4M1	653 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	CDKL2	Q92772	493 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	TLCD1	Q96CP7	247 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	HEPH	Q9BQS7	1158 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	PHF7	Q9BWX1	381 aa	Predicted RBP	11.27	□□□□□ -0.6
APTX-223	ENST00000479656	SUV39H2	Q9H5I1	410 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	PPCS	Q9HAB8	311 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	ZDHHC4	Q9NPG8	344 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.27	□□□□□ -0.6
APTX-223	ENST00000479656	LGALS13	Q9UHV8	139 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	IKBKG	Q9Y6K9	419 aa		11.27	□□□□□ -0.6
APTX-223	ENST00000479656	ANKRD36	A6QL64	1941 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	MYLK	Q15746	1914 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	WASH3P	C4AMC7	463 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	SOCS5	O75159	536 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	APOD	P05090	189 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	ALPI	P09923	528 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	HLA-E	P13747	358 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	GRIA2	P42262	883 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	ARCN1	P48444	511 aa	Known RBP	11.27	□□□□□ -0.61
APTX-223	ENST00000479656	GYS2	P54840	703 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	TMPRSS15	P98073	1019 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	FRG1	Q14331	258 aa	Known RBP	11.27	□□□□□ -0.61
APTX-223	ENST00000479656	RASA2	Q15283	850 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	GLIPR1L2	Q4G1C9	344 aa		11.27	□□□□□ -0.61
APTX-223	ENST00000479656	ARSI	Q5FYB1	569 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms