RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 NSMCE2Q96MF7 247 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 PIGVQ9NUD9 493 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 ATAD3AQ9NVI7 634 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 TMEM216Q9P0N5 145 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 A8MUI8 341 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 ABLIM1O14639 778 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 LIN7AO14910 233 aaPredicted RBP14.41□□□□□ -0.1
COL20A1-206ENST00000479501 MATN3O15232 486 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 CD3EAPO15446 510 aaKnown RBP14.41□□□□□ -0.1
COL20A1-206ENST00000479501 CKBP12277 381 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 SERPINA4P29622 427 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 ECHS1P30084 290 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 GLUD2P49448 558 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 RAD23AP54725 363 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 YBEYP58557 167 aaPredicted RBP14.41□□□□□ -0.1
COL20A1-206ENST00000479501 MAPK11Q15759 364 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 NRF1Q16656 503 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 OR4L1Q8NH43 312 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 PTCD2Q8WV60 388 aaKnown RBP14.41□□□□□ -0.1
COL20A1-206ENST00000479501 VRTNQ9H8Y1 702 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 NMRK1Q9NWW6 199 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 GDAP2Q9NXN4 497 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 C10orf71Q711Q0 1435 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 CCDC154A6NI56 674 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 HCRTO43612 131 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 UGT1A9O60656 530 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 SNRPB2P08579 225 aaKnown RBP14.4□□□□□ -0.1
COL20A1-206ENST00000479501 KCNE1P15382 129 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 GRK4P32298 578 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 CCNHP51946 323 aaPredicted RBP14.4□□□□□ -0.1
COL20A1-206ENST00000479501 CDH13P55290 713 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 SMARCB1Q12824 385 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 BOP1Q14137 746 aaKnown RBP14.4□□□□□ -0.1
COL20A1-206ENST00000479501 GRB14Q14449 540 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 NCBP2-AS2Q69YL0 99 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 BNIPLQ7Z465 357 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 WDTC1Q8N5D0 677 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 EFCAB3Q8N7B9 438 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 RBM15BQ8NDT2 890 aaKnown RBP14.4□□□□□ -0.1
COL20A1-206ENST00000479501 DLG3Q92796 817 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 FAM210AQ96ND0 272 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 PANX3Q96QZ0 392 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 SEPHS2Q99611 448 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 ASB8Q9H765 288 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 UGT1A7Q9HAW7 530 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 UGT1A10Q9HAW8 530 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 UGT1A8Q9HAW9 530 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 ZMYM5Q9UJ78 669 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 AGO1Q9UL18 857 aaKnown RBP14.4□□□□□ -0.1
COL20A1-206ENST00000479501 TNPO3Q9Y5L0 923 aaKnown RBP14.4□□□□□ -0.1
COL20A1-206ENST00000479501 SLC18A1P54219 525 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 CLDN10P78369 228 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 DMPKQ09013 629 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 KCNJ11Q14654 390 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 DEFB115Q30KQ5 88 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 DHDDSQ86SQ9 333 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 SCAMP5Q8TAC9 235 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 DCAKDQ8WVC6 231 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 RSPH1Q8WYR4 309 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 RCN3Q96D15 328 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 IGKV6-21A0A0C4DH24 114 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 UNCXA6NJT0 531 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 STAU1O95793 577 aaKnown RBP14.4□□□□□ -0.1
COL20A1-206ENST00000479501 AMHP03971 560 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 MPSTP25325 297 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 PIK3R1P27986 724 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 CYP51A1Q16850 503 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 EML3Q32P44 896 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 BHLHE22Q8NFJ8 381 aaPredicted RBP14.4□□□□□ -0.1
COL20A1-206ENST00000479501 MTERF3Q96E29 417 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 C16orf70Q9BSU1 422 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 HAPLN2Q9GZV7 340 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 SLC25A51Q9H1U9 297 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 BPIFA1Q9NP55 256 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 PEX11AO75192 247 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 PSME3P61289 254 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 TRAF2Q12933 501 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 ESRP1Q6NXG1 681 aaKnown RBP14.4□□□□□ -0.1
COL20A1-206ENST00000479501 CENPLQ8N0S6 344 aaPredicted RBP14.4□□□□□ -0.1
COL20A1-206ENST00000479501 STX19Q8N4C7 294 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 TBC1D19Q8N5T2 526 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 NXNL1Q96CM4 212 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 FAM120BQ96EK7 910 aaKnown RBP14.4□□□□□ -0.1
COL20A1-206ENST00000479501 OTUB1Q96FW1 271 aaPredicted RBP14.4□□□□□ -0.1
COL20A1-206ENST00000479501 PEBP4Q96S96 227 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 TMPRSS4Q9NRS4 437 aa14.4□□□□□ -0.1
COL20A1-206ENST00000479501 MRPL17Q9NRX2 175 aaKnown RBP14.4□□□□□ -0.1
COL20A1-206ENST00000479501 LRP5O75197 1615 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 TYMPP19971 482 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 NMBRP28336 390 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 MAPK10P53779 464 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 NR1H2P55055 460 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 KLF10Q13118 480 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 MAD2L1Q13257 205 aaPredicted RBP14.39□□□□□ -0.11
COL20A1-206ENST00000479501 SQLEQ14534 574 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 PGS1Q32NB8 556 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 SLC9A4Q6AI14 798 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 IL27RAQ6UWB1 636 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 MPP5Q8N3R9 675 aa14.39□□□□□ -0.11
COL20A1-206ENST00000479501 DHRSXQ8N5I4 330 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms