RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 CASQ1P31415 396 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 CD68P34810 354 aaPredicted RBP15.32■□□□□ 0.04
COL16A1-211ENST00000479100 EPHB1P54762 984 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 PPP2CBP62714 309 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 POLR2LP62875 67 aaKnown RBP15.32■□□□□ 0.04
COL16A1-211ENST00000479100 PPP2CAP67775 309 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 FAM193AP78312 1265 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 SKOR1P84550 965 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 IHHQ14623 411 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 SF3A2Q15428 464 aaKnown RBP15.32■□□□□ 0.04
COL16A1-211ENST00000479100 SIX1Q15475 284 aaPredicted RBP15.32■□□□□ 0.04
COL16A1-211ENST00000479100 CCDC6Q16204 474 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 PCSK7Q16549 785 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 UGP2Q16851 508 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 SPDYCQ5MJ68 293 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 WDR45BQ5MNZ6 344 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 ANKRD20A2Q5SQ80 823 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 ANKRD20A1Q5TYW2 823 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 ANKRD20A3Q5VUR7 823 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 ITPRIPL1Q6GPH6 555 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 ERAP2Q6P179 960 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 SYT10Q6XYQ8 523 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 RASGEF1CQ8N431 466 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 SPATA22Q8NHS9 363 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 CCDC110Q8TBZ0 833 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 KLK6Q92876 244 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 ECHDC3Q96DC8 303 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 IMP4Q96G21 291 aaKnown RBP15.32■□□□□ 0.04
COL16A1-211ENST00000479100 FEM1CQ96JP0 617 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 CAPZA3Q96KX2 299 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 NAP1L3Q99457 506 aaPredicted RBP15.32■□□□□ 0.04
COL16A1-211ENST00000479100 PCED1AQ9H1Q7 454 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 KDM4CQ9H3R0 1056 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 USP29Q9HBJ7 922 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 PREBQ9HCU5 417 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 PCDH12Q9NPG4 1184 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 UBP1Q9NZI7 540 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 GGT7Q9UJ14 662 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 THADAQ6YHU6 1953 aa15.32■□□□□ 0.04
COL16A1-211ENST00000479100 ATXN2Q99700 1313 aaKnown RBP15.32■□□□□ 0.04
COL16A1-211ENST00000479100 PLXND1Q9Y4D7 1925 aa15.31■□□□□ 0.04
COL16A1-211ENST00000479100 A0A1W2PQ67 120 aa15.31■□□□□ 0.04
COL16A1-211ENST00000479100 CFAP69A5D8W1 941 aa15.31■□□□□ 0.04
COL16A1-211ENST00000479100 A8MX80 341 aa15.31■□□□□ 0.04
COL16A1-211ENST00000479100 HTRA2O43464 458 aaPredicted RBP15.31■□□□□ 0.04
COL16A1-211ENST00000479100 AP1G1O43747 822 aa15.31■□□□□ 0.04
COL16A1-211ENST00000479100 PMPCBO75439 489 aa15.31■□□□□ 0.04
COL16A1-211ENST00000479100 PGLSO95336 258 aa15.31■□□□□ 0.04
COL16A1-211ENST00000479100 MT-CYBP00156 380 aaPredicted RBP15.31■□□□□ 0.04
COL16A1-211ENST00000479100 PDHA1P08559 390 aa15.31■□□□□ 0.04
COL16A1-211ENST00000479100 CTPS1P17812 591 aa15.31■□□□□ 0.04
COL16A1-211ENST00000479100 SUOXP51687 545 aa15.31■□□□□ 0.04
COL16A1-211ENST00000479100 ELP6Q0PNE2 266 aa15.31■□□□□ 0.04
COL16A1-211ENST00000479100 CCNG2Q16589 344 aa15.31■□□□□ 0.04
COL16A1-211ENST00000479100 ARHGEF18Q6ZSZ5 1173 aa15.31■□□□□ 0.04
COL16A1-211ENST00000479100 PRPF39Q86UA1 669 aaKnown RBP15.31■□□□□ 0.04
COL16A1-211ENST00000479100 TAB3Q8N5C8 712 aaPredicted RBP15.31■□□□□ 0.04
COL16A1-211ENST00000479100 BIRC7Q96CA5 298 aa15.31■□□□□ 0.04
COL16A1-211ENST00000479100 SPATA13Q96N96 652 aa15.31■□□□□ 0.04
COL16A1-211ENST00000479100 WRAP53Q9BUR4 548 aaKnown RBP15.31■□□□□ 0.04
COL16A1-211ENST00000479100 AP1M1Q9BXS5 423 aa15.31■□□□□ 0.04
COL16A1-211ENST00000479100 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.31■□□□□ 0.04
COL16A1-211ENST00000479100 EIF2B4Q9UI10 523 aaKnown RBP15.31■□□□□ 0.04
COL16A1-211ENST00000479100 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.31■□□□□ 0.04
COL16A1-211ENST00000479100 SAR1BQ9Y6B6 198 aa15.31■□□□□ 0.04
COL16A1-211ENST00000479100 C5orf60A6NFR6 353 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 TSPAN6O43657 245 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 MMP20O60882 483 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 IFNB1P01574 187 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 IGHV4-34P06331 123 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 ADRB1P08588 477 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 MPLP40238 635 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 CCR5P51681 352 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 GDF10P55107 478 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 ETF1P62495 437 aaKnown RBP15.3■□□□□ 0.04
COL16A1-211ENST00000479100 OASLQ15646 514 aaKnown RBP15.3■□□□□ 0.04
COL16A1-211ENST00000479100 PAPD7Q5XG87 772 aaKnown RBP15.3■□□□□ 0.04
COL16A1-211ENST00000479100 SEL1L3Q68CR1 1132 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 GSTA5Q7RTV2 222 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 HORMAD1Q86X24 394 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 NDUFAF2Q8N183 169 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 LPCAT1Q8NF37 534 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 ACTRT1Q8TDG2 376 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 CXorf40AQ8TE69 158 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 IFT43Q96FT9 208 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 C16orf45Q96MC5 204 aaPredicted RBP15.3■□□□□ 0.04
COL16A1-211ENST00000479100 FCRL5Q96RD9 977 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 TDRD1Q9BXT4 1180 aaKnown RBP15.3■□□□□ 0.04
COL16A1-211ENST00000479100 GBA3Q9H227 469 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 SMOC1Q9H4F8 434 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 PCDH9Q9HC56 1237 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 HOMER3Q9NSC5 361 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 FAM153AQ9UHL3 310 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 TTC7AQ9ULT0 858 aaPredicted RBP15.3■□□□□ 0.04
COL16A1-211ENST00000479100 PHTF1Q9UMS5 762 aa15.3■□□□□ 0.04
COL16A1-211ENST00000479100 IGLON5A6NGN9 336 aa15.29■□□□□ 0.04
COL16A1-211ENST00000479100 CES2O00748 559 aa15.29■□□□□ 0.04
COL16A1-211ENST00000479100 RIOK3O14730 519 aaKnown RBP15.29■□□□□ 0.04
COL16A1-211ENST00000479100 AREL1O15033 823 aa15.29■□□□□ 0.04
COL16A1-211ENST00000479100 SLC31A1O15431 190 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms