RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 YWHAQP27348 245 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 PBX3P40426 434 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 CDH13P55290 713 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 NME5P56597 212 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 ART3Q13508 389 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 NRF1Q16656 503 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 CLLU1OSQ5K130 101 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 SPATA24Q86W54 205 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 ST13P4Q8IZP2 240 aaPredicted RBP10.88□□□□□ -0.67
VPS52-217ENST00000478934 CFAP52Q8N1V2 620 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 OR52K2Q8NGK3 314 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 RDH11Q8TC12 318 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 JADE3Q92613 823 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 TRAPPC9Q96Q05 1148 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 PKP2Q99959 881 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 SH3GL3Q99963 347 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 SLC39A3Q9BRY0 314 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 CRISPLD1Q9H336 500 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 ZBTB26Q9HCK0 441 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 ADA2Q9NZK5 511 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 SCN10AQ9Y5Y9 1956 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 A0A0U1RQS6 177 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 PSMD3O43242 534 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 PEX1O43933 1283 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 DNAJA2O60884 412 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 PRDX6P30041 224 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 GATMP50440 423 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 SERPINH1P50454 418 aaKnown RBP10.87□□□□□ -0.67
VPS52-217ENST00000478934 TBX4P57082 545 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 ROR2Q01974 943 aaKnown RBP10.87□□□□□ -0.67
VPS52-217ENST00000478934 UGP2Q16851 508 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 PIGGQ5H8A4 983 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 TECRLQ5HYJ1 363 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 PITRM1Q5JRX3 1037 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 SIRPB2Q5JXA9 342 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 HECTD2Q5U5R9 776 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 KIAA0930Q6ICG6 404 aaPredicted RBP10.87□□□□□ -0.67
VPS52-217ENST00000478934 FBXL22Q6P050 247 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 ADGRG6Q86SQ4 1221 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 ZNF683Q8IZ20 524 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 RP9Q8TA86 221 aaKnown RBP10.87□□□□□ -0.67
VPS52-217ENST00000478934 PIP4K2CQ8TBX8 421 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 FAM110BQ8TC76 370 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 IMP4Q96G21 291 aaKnown RBP10.87□□□□□ -0.67
VPS52-217ENST00000478934 CNDP1Q96KN2 507 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 TBATAQ96M53 351 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 CYP2S1Q96SQ9 504 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 MRPL57Q9BQC6 102 aaKnown RBP10.87□□□□□ -0.67
VPS52-217ENST00000478934 UBE2OQ9C0C9 1292 aaKnown RBP10.87□□□□□ -0.67
VPS52-217ENST00000478934 NSMCE4AQ9NXX6 385 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 CCDC167Q9P0B6 97 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 UXTQ9UBK9 157 aaPredicted RBP10.87□□□□□ -0.67
VPS52-217ENST00000478934 STK39Q9UEW8 545 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 ARL5AQ9Y689 179 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 CROCCQ5TZA2 2017 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 SCN4AP35499 1836 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 ADAMTS4O75173 837 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 H2AFYO75367 372 aaKnown RBP10.87□□□□□ -0.67
VPS52-217ENST00000478934 HADHAP40939 763 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 RAB27AP51159 221 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 CDKL1Q00532 357 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 GALNT3Q14435 633 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 SEMA3AQ14563 771 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 MBTPS1Q14703 1052 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 PTPRRQ15256 657 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 MARC1Q5VT66 337 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 UGT2A3Q6UWM9 527 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 CYP2R1Q6VVX0 501 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 CPSF7Q8N684 471 aaKnown RBP10.87□□□□□ -0.67
VPS52-217ENST00000478934 SPPL2BQ8TCT7 592 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 ATP6V1E2Q96A05 226 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 LRGUKQ96M69 825 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 SLC25A51Q9H1U9 297 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 OCEL1Q9H607 264 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 TRPC7Q9HCX4 862 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 NMRK2Q9NPI5 230 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 NCKIPSDQ9NZQ3 722 aa10.87□□□□□ -0.67
VPS52-217ENST00000478934 CCDC160A6NGH7 325 aa10.86□□□□□ -0.67
VPS52-217ENST00000478934 TRPA1O75762 1119 aa10.86□□□□□ -0.67
VPS52-217ENST00000478934 SIX3O95343 332 aaPredicted RBP10.86□□□□□ -0.67
VPS52-217ENST00000478934 CRTAMO95727 393 aa10.86□□□□□ -0.67
VPS52-217ENST00000478934 ATP5F1P24539 256 aaPredicted RBP10.86□□□□□ -0.67
VPS52-217ENST00000478934 CYP2C18P33260 490 aa10.86□□□□□ -0.67
VPS52-217ENST00000478934 SOX11P35716 441 aa10.86□□□□□ -0.67
VPS52-217ENST00000478934 ZNF135P52742 658 aaPredicted RBP10.86□□□□□ -0.67
VPS52-217ENST00000478934 SATB1Q01826 763 aa10.86□□□□□ -0.67
VPS52-217ENST00000478934 PRKCZQ05513 592 aa10.86□□□□□ -0.67
VPS52-217ENST00000478934 OGFRL1Q5TC84 451 aaPredicted RBP10.86□□□□□ -0.67
VPS52-217ENST00000478934 CYHR1Q6ZMK1 362 aa10.86□□□□□ -0.67
VPS52-217ENST00000478934 ZNF598Q86UK7 904 aaKnown RBP10.86□□□□□ -0.67
VPS52-217ENST00000478934 CUZD1Q86UP6 607 aa10.86□□□□□ -0.67
VPS52-217ENST00000478934 LZTR1Q8N653 840 aa10.86□□□□□ -0.67
VPS52-217ENST00000478934 OR13C4Q8NGS5 318 aa10.86□□□□□ -0.67
VPS52-217ENST00000478934 BLOC1S5Q8TDH9 187 aa10.86□□□□□ -0.67
VPS52-217ENST00000478934 LINC01599Q8WXQ3 324 aa10.86□□□□□ -0.67
VPS52-217ENST00000478934 SLC39A13Q96H72 371 aa10.86□□□□□ -0.67
VPS52-217ENST00000478934 DNAJC1Q96KC8 554 aaKnown RBP10.86□□□□□ -0.67
VPS52-217ENST00000478934 C3orf30Q96M34 536 aa10.86□□□□□ -0.67
VPS52-217ENST00000478934 NSMCE3Q96MG7 304 aa10.86□□□□□ -0.67
VPS52-217ENST00000478934 ZDHHC7Q9NXF8 308 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms