RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 A0A087WXM4 84 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 hCG_1809904A0A1W2PP81 198 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 A0A1W2PPE2 198 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 A0A1W2PR64 198 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 A0A1W2PRV1 198 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 M0QYV0 167 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 METTL18O95568 372 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 IGSF6O95976 241 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 PAEPP09466 180 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 POU1F1P28069 291 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 SLC15A1P46059 708 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 APLP1P51693 650 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 OSTNP61366 133 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 CDK3Q00526 305 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 SLC3A1Q07837 685 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 TRNP1Q6NT89 227 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 ERICH5Q6P6B1 374 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 PTAR1Q7Z6K3 402 aaPredicted RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 FAM228AQ86W67 206 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 CCDC28AQ8IWP9 274 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 OR2AJ1Q8NGZ0 328 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 ACSF2Q96CM8 615 aaPredicted RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 AIFM3Q96NN9 605 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 PLEKHF1Q96S99 279 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 AARSD1Q9BTE6 412 aaKnown RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 C6orf62Q9GZU0 229 aaPredicted RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 MTFR1LQ9H019 292 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 TMEM100Q9NV29 134 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 HSPBP1Q9NZL4 362 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 ZNF222Q9UK12 451 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 C2CD2Q9Y426 696 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 HBS1LQ9Y450 684 aaKnown RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 ZNF521Q96K83 1311 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 SEC24DO94855 1032 aaPredicted RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 FTH1P02794 183 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 HMGCRP04035 888 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 IFNGR1P15260 489 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 GLB1P16278 677 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 ZNF7P17097 686 aaPredicted RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 COTL1Q14019 142 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 TRMT5Q32P41 509 aaKnown RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 SETMARQ53H47 684 aaPredicted RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 AKIRIN2Q53H80 203 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 C10orf120Q5SQS8 335 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 NELFCDQ8IXH7 590 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 LRRC20Q8TCA0 184 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 ZNF285Q96NJ3 590 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 OR10A4Q9H209 315 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 C19orf25Q9UFG5 118 aaPredicted RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 AGAP1Q9UPQ3 857 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 AP4B1Q9Y6B7 739 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 ARHGEF11O15085 1522 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 A0A0D9SFI3 127 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 RIIAD1A6NNX1 92 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 H3BNX3 289 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 EDF1O60869 148 aaKnown RBP5.45□□□□□ -1.54
USF3-202ENST00000478658 AVPR1AP37288 418 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 DLG4P78352 724 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 TLE4Q04727 773 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 TRIM28Q13263 835 aaKnown RBP5.45□□□□□ -1.54
USF3-202ENST00000478658 ORC1Q13415 861 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 NFE2Q16621 373 aaPredicted RBP5.45□□□□□ -1.54
USF3-202ENST00000478658 SULT1C3Q6IMI6 304 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 PTCHD4Q6ZW05 846 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 FOXP4Q8IVH2 680 aaPredicted RBP5.45□□□□□ -1.54
USF3-202ENST00000478658 LRRC71Q8N4P6 559 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 RDH11Q8TC12 318 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 SLC35F5Q8WV83 523 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 SIPA1Q96FS4 1042 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 DHRS1Q96LJ7 313 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 REEP2Q9BRK0 252 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 PRMT7Q9NVM4 692 aaPredicted RBP5.45□□□□□ -1.54
USF3-202ENST00000478658 HPSEQ9Y251 543 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 BIVM-ERCC5R4GMW8 1640 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 NPIPA5A0A0B4J1W7 369 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 PNMA6FA0A0J9YX94 578 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 FAM47DPA6NHR8 397 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 PER2O15055 1255 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 CASC3O15234 703 aaKnown RBP5.45□□□□□ -1.54
USF3-202ENST00000478658 SLC16A3O15427 465 aaKnown RBP5.45□□□□□ -1.54
USF3-202ENST00000478658 SOX30O94993 753 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 PAPSS2O95340 614 aaPredicted RBP5.45□□□□□ -1.54
USF3-202ENST00000478658 AMHP03971 560 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 CCNYL3P0C7X3 344 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 CCNB1P14635 433 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 CHRM3P20309 590 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 CCNCP24863 283 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 CDK2P24941 298 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 SLC6A3Q01959 620 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 MTX1Q13505 466 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 ZNF234Q14588 700 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 PDK2Q15119 407 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 CCSAPQ6IQ19 270 aaPredicted RBP5.45□□□□□ -1.54
USF3-202ENST00000478658 RIPOR1Q6ZS17 1223 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 SYT12Q8IV01 421 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 KCNV2Q8TDN2 545 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 PIGBQ92521 554 aa5.45□□□□□ -1.54
USF3-202ENST00000478658 KIAA1143Q96AT1 154 aaPredicted RBP5.45□□□□□ -1.54
USF3-202ENST00000478658 NMD3Q96D46 503 aaKnown RBP5.45□□□□□ -1.54
USF3-202ENST00000478658 GAS2L1Q99501 681 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms