RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	C6	P13671	934 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	JUND	P17535	347 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	ACP1	P24666	158 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	HNF1B	P35680	557 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	LIG3	P49916	1009 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	ARSE	P51690	589 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	DAB2	P98082	770 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	DPYSL3	Q14195	570 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	PDK2	Q15119	407 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	PROX2	Q3B8N5	592 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	MARC1	Q5VT66	337 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	ZSWIM9	Q86XI8	627 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	CNGA4	Q8IV77	575 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	BTN2A2	Q8WVV5	523 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	NUDCD1	Q96RS6	583 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	DUSP23	Q9BVJ7	150 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	SCUBE2	Q9NQ36	999 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	CSNK1G3	Q9Y6M4	447 aa		13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.9	□□□□□ -0.18
HDAC7-222	ENST00000477937	CEP295	Q9C0D2	2601 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937		A0A1W2PQ67	120 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	FAM149A	A5PLN7	773 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	TMEM110-MUSTN1	A8MSY1	372 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	TRAFD1	O14545	582 aa	Predicted RBP	13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	PRKCG	P05129	697 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	GIMD1	P0DJR0	217 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	JUP	P14923	745 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	NFKBIA	P25963	317 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	MMP13	P45452	471 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	PEX5	P50542	639 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	EIF2B5	Q13144	721 aa	Known RBP	13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	MESD	Q14696	234 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	AGER	Q15109	404 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	IRF4	Q15306	451 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	WSCD2	Q2TBF2	565 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	ANKRD20A8P	Q5CZ79	823 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	RALGPS1	Q5JS13	557 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	TPRG1L	Q5T0D9	272 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	ZFYVE27	Q5T4F4	411 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	FAXC	Q5TGI0	409 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	KDM7A	Q6ZMT4	941 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	RHOT2	Q8IXI1	618 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	SLC35G2	Q8TBE7	412 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	MGME1	Q9BQP7	344 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	ZNF670	Q9BS34	389 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	SLC13A1	Q9BZW2	595 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	CCDC86	Q9H6F5	360 aa	Known RBP	13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	CAAP1	Q9H8G2	361 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	EVA1B	Q9NVM1	165 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	KLF15	Q9UIH9	416 aa		13.89	□□□□□ -0.19
HDAC7-222	ENST00000477937	EPG5	Q9HCE0	2579 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	LRP4	O75096	1905 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	TTC24	A2A3L6	582 aa	Predicted RBP	13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937		K7ESM1	405 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	AQP9	O43315	295 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	SOCS5	O75159	536 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	NEBL	O76041	1014 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	CAPNS1	P04632	268 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	ELFN1	P0C7U0	828 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	CKMT1A	P12532	417 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	CR2	P20023	1033 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	HTR1B	P28222	390 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	MAN1A1	P33908	653 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	GARS	P41250	739 aa	Known RBP	13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	ARHGAP25	P42331	645 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	DUSP3	P51452	185 aa	Predicted RBP	13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	TAS2R40	P59535	323 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	E2F1	Q01094	437 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	SEMG2	Q02383	582 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	INPP5A	Q14642	412 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	PAFAH1B3	Q15102	231 aa	Known RBP	13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	LIPI	Q6XZB0	460 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	MACC1	Q6ZN28	852 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	MARCH9	Q86YJ5	346 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	CPNE8	Q86YQ8	564 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	PGBD5	Q8N414	524 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	PDCD7	Q8N8D1	485 aa	Known RBP	13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	FAM181A	Q8N9Y4	354 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	PCDH19	Q8TAB3	1148 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	LMX1A	Q8TE12	382 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	PDCD6IP	Q8WUM4	868 aa	Known RBP	13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	SPOCK2	Q92563	424 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	APOLD1	Q96LR9	279 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	NSMCE3	Q96MG7	304 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	APOO	Q9BUR5	198 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	TRIM5	Q9C035	493 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	NOD2	Q9HC29	1040 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	SPTLC3	Q9NUV7	552 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	SPAST	Q9UBP0	616 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	PCDHGC4	Q9Y5F7	938 aa		13.88	□□□□□ -0.19
HDAC7-222	ENST00000477937	TRABD2B	A6NFA1	517 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	SRRM3	A6NNA2	597 aa	Predicted RBP	13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	HTRA2	O43464	458 aa	Predicted RBP	13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	MFSD11	O43934	449 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	RECQL5	O94762	991 aa	Predicted RBP	13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	KDELR1	P24390	212 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	BLK	P51451	505 aa		13.87	□□□□□ -0.19

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