RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 TP53BP1Q12888 1972 aaPredicted RBP15.44■□□□□ 0.06
SEC13-215ENST00000477547 ZNF106Q9H2Y7 1883 aaKnown RBP15.44■□□□□ 0.06
SEC13-215ENST00000477547 MAP1BP46821 2468 aaKnown RBP15.44■□□□□ 0.06
SEC13-215ENST00000477547 CTAGE15A4D2H0 777 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 C16orf96A6NNT2 1141 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 UPK3BL1B0FP48 263 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 UPK3BL2E5RIL1 263 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 TTI1O43156 1089 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 PGLSO95336 258 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 CTAGE8P0CG41 777 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 ADRB3P13945 408 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 XPAP23025 273 aaPredicted RBP15.43■□□□□ 0.06
SEC13-215ENST00000477547 P2RY2P41231 377 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 PTGIRP43119 386 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 TNNT3P45378 269 aaPredicted RBP15.43■□□□□ 0.06
SEC13-215ENST00000477547 TPMTP51580 245 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 WNT3AP56704 352 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 SFSWAPQ12872 951 aaKnown RBP15.43■□□□□ 0.06
SEC13-215ENST00000477547 GPS1Q13098 491 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 ST3GAL2Q16842 350 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 PIP5KL1Q5T9C9 394 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 AGBL4Q5VU57 503 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 FBXL19Q6PCT2 694 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 ERN2Q76MJ5 926 aaKnown RBP15.43■□□□□ 0.06
SEC13-215ENST00000477547 CTAGE6Q86UF2 777 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 FAM124AQ86V42 546 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 ZSWIM9Q86XI8 627 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 CTAGE4Q8IX94 777 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 LPCAT1Q8NF37 534 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 IFT43Q96FT9 208 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 FEM1CQ96JP0 617 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 SPACA7Q96KW9 195 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 TRIM51Q9BSJ1 452 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 FICDQ9BVA6 458 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 HDAC8Q9BY41 377 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 NCDNQ9UBB6 729 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 FZD4Q9ULV1 537 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 CHKBQ9Y259 395 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 NCKAP1Q9Y2A7 1128 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 AAR2Q9Y312 384 aaKnown RBP15.43■□□□□ 0.06
SEC13-215ENST00000477547 PCDHB9Q9Y5E1 797 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 CCDC163A0A0D9SF12 145 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 A0A1W2PQ67 120 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 DCDC2BA2VCK2 349 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 E7EVH7 732 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 SLC7A4O43246 635 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 ZNF217O75362 1048 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 IGLV3-19P01714 112 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 ABL2P42684 1182 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 EPHB1P54762 984 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 SEMA5AQ13591 1074 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 GALNT3Q14435 633 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 SYDE1Q6ZW31 735 aaPredicted RBP15.43■□□□□ 0.06
SEC13-215ENST00000477547 KDELC2Q7Z4H8 507 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 WDR5BQ86VZ2 330 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 CEP112Q8N8E3 955 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 CCHCR1Q8TD31 782 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 RLN3Q8WXF3 142 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 LRRC45Q96CN5 670 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 ETNK1Q9HBU6 452 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 NEU2Q9Y3R4 380 aa15.43■□□□□ 0.06
SEC13-215ENST00000477547 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.42■□□□□ 0.06
SEC13-215ENST00000477547 IGHV1OR15-9A0A0B4J2B8 117 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 RAD51CO43502 376 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 FZD6O60353 706 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 AP2A1O95782 977 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 PRKCGP05129 697 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 PDHA1P08559 390 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 GRIA4P48058 902 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 LMAN1P49257 510 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 ADPRHP54922 357 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 CDK18Q07002 472 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 CCDC15Q0P6D6 951 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 SYCP2LQ5T4T6 812 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 C8orf74Q6P047 294 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.42■□□□□ 0.06
SEC13-215ENST00000477547 USP45Q70EL2 814 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 LONP2Q86WA8 852 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 KLHDC8BQ8IXV7 354 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 PDCD7Q8N8D1 485 aaKnown RBP15.42■□□□□ 0.06
SEC13-215ENST00000477547 HCAR2Q8TDS4 363 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 SPOCK2Q92563 424 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 FAM131CQ96AQ9 280 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 MRGPRX2Q96LB1 330 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 TRIB3Q96RU7 358 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 CARD6Q9BX69 1037 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 ADGRE3Q9BY15 652 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 FAM126AQ9BYI3 521 aaPredicted RBP15.42■□□□□ 0.06
SEC13-215ENST00000477547 LRRC40Q9H9A6 602 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 L2HGDHQ9H9P8 463 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 ITM2CQ9NQX7 267 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 ITM2BQ9Y287 266 aa15.42■□□□□ 0.06
SEC13-215ENST00000477547 ERI2A8K979 691 aaKnown RBP15.41■□□□□ 0.06
SEC13-215ENST00000477547 NDST3O95803 873 aa15.41■□□□□ 0.06
SEC13-215ENST00000477547 PRLP01236 227 aa15.41■□□□□ 0.06
SEC13-215ENST00000477547 APRTP07741 180 aa15.41■□□□□ 0.06
SEC13-215ENST00000477547 NFKBIAP25963 317 aa15.41■□□□□ 0.06
SEC13-215ENST00000477547 CHRNA4P43681 627 aa15.41■□□□□ 0.06
SEC13-215ENST00000477547 TERF1P54274 439 aa15.41■□□□□ 0.06
SEC13-215ENST00000477547 RPL26P61254 145 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms