RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 FAM102AQ5T9C2 384 aaPredicted RBP10.55□□□□□ -0.72
TRAIP-206ENST00000477546 LVRNQ6Q4G3 990 aa10.55□□□□□ -0.72
TRAIP-206ENST00000477546 SLC26A9Q7LBE3 791 aa10.55□□□□□ -0.72
TRAIP-206ENST00000477546 ZNF677Q86XU0 584 aa10.55□□□□□ -0.72
TRAIP-206ENST00000477546 ZDHHC17Q8IUH5 632 aa10.55□□□□□ -0.72
TRAIP-206ENST00000477546 TP53INP2Q8IXH6 220 aa10.55□□□□□ -0.72
TRAIP-206ENST00000477546 DEFB106AQ8N104 65 aa10.55□□□□□ -0.72
TRAIP-206ENST00000477546 PCDH19Q8TAB3 1148 aa10.55□□□□□ -0.72
TRAIP-206ENST00000477546 SCG3Q8WXD2 468 aaKnown RBP10.55□□□□□ -0.72
TRAIP-206ENST00000477546 CPA5Q8WXQ8 436 aa10.55□□□□□ -0.72
TRAIP-206ENST00000477546 STARD8Q92502 1023 aa10.55□□□□□ -0.72
TRAIP-206ENST00000477546 PMEPA1Q969W9 287 aa10.55□□□□□ -0.72
TRAIP-206ENST00000477546 SLC2A13Q96QE2 648 aa10.55□□□□□ -0.72
TRAIP-206ENST00000477546 DDX50Q9BQ39 737 aaKnown RBP10.55□□□□□ -0.72
TRAIP-206ENST00000477546 SLC13A1Q9BZW2 595 aa10.55□□□□□ -0.72
TRAIP-206ENST00000477546 RTN4Q9NQC3 1192 aaKnown RBP10.55□□□□□ -0.72
TRAIP-206ENST00000477546 SEPT11Q9NVA2 429 aaKnown RBP10.55□□□□□ -0.72
TRAIP-206ENST00000477546 DDIT4Q9NX09 232 aa10.55□□□□□ -0.72
TRAIP-206ENST00000477546 SIRPGQ9P1W8 387 aa10.55□□□□□ -0.72
TRAIP-206ENST00000477546 APPL1Q9UKG1 709 aa10.55□□□□□ -0.72
TRAIP-206ENST00000477546 ITGB1BP2Q9UKP3 347 aa10.55□□□□□ -0.72
TRAIP-206ENST00000477546 GOLGA6L7A0A1B0GV03 622 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 HEATR9A2RTY3 570 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 GOLGA6L19H0YKK7 550 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 GOLGA8SH3BPF8 625 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 HGSO14964 777 aaPredicted RBP10.54□□□□□ -0.72
TRAIP-206ENST00000477546 RAD51BO15315 384 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 LUC7L3O95232 432 aaKnown RBP10.54□□□□□ -0.72
TRAIP-206ENST00000477546 IGLV3-25P01717 112 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 VASPP50552 380 aaPredicted RBP10.54□□□□□ -0.72
TRAIP-206ENST00000477546 RNASE9P60153 205 aaKnown RBP10.54□□□□□ -0.72
TRAIP-206ENST00000477546 PFN3P60673 137 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 FMO1Q01740 532 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 SULT2A1Q06520 285 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 NME3Q13232 169 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 PTK2BQ14289 1009 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 TESK1Q15569 626 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 C2CD6Q53TS8 623 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 ZC3H12AQ5D1E8 599 aaKnown RBP10.54□□□□□ -0.72
TRAIP-206ENST00000477546 NADSYN1Q6IA69 706 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 TRIM72Q6ZMU5 477 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 CHSY1Q86X52 802 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 APCDD1Q8J025 514 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 RNF34Q969K3 372 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 C18orf8Q96DM3 657 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 DDA1Q9BW61 102 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 SLC17A9Q9BYT1 436 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 NUCKS1Q9H1E3 243 aaKnown RBP10.54□□□□□ -0.72
TRAIP-206ENST00000477546 SEMA6CQ9H3T2 930 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 CYP4F12Q9HCS2 524 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 DOLKQ9UPQ8 538 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 B3GALT1Q9Y5Z6 326 aa10.54□□□□□ -0.72
TRAIP-206ENST00000477546 ANKHD1Q8IWZ3 2542 aaKnown RBP10.53□□□□□ -0.72
TRAIP-206ENST00000477546 PCSK5Q92824 1860 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 A0A1B0GTH6 734 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 M0QYT0 321 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 FPGTO14772 594 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 RFPL1O75677 317 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 PAK4O96013 591 aaPredicted RBP10.53□□□□□ -0.72
TRAIP-206ENST00000477546 PDGFAP04085 211 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 SLC2A3P11169 496 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 FGF3P11487 239 aaPredicted RBP10.53□□□□□ -0.72
TRAIP-206ENST00000477546 PNLIPP16233 465 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 CHRNB2P17787 502 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 TCN2P20062 427 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 SCNN1AP37088 669 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 NSFP46459 744 aaKnown RBP10.53□□□□□ -0.72
TRAIP-206ENST00000477546 GABRB2P47870 512 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 SULT1E1P49888 294 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 RPS21P63220 83 aaKnown RBP10.53□□□□□ -0.72
TRAIP-206ENST00000477546 ELOCQ15369 112 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 INPP5JQ15735 1006 aaPredicted RBP10.53□□□□□ -0.72
TRAIP-206ENST00000477546 MAP9Q49MG5 647 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 ATP1A1-AS1Q5TC04 95 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 RAP1GAP2Q684P5 730 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 KIAA1161Q6NSJ0 714 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 SPRED1Q7Z699 444 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 XYLT1Q86Y38 959 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 FSTL5Q8N475 847 aaPredicted RBP10.53□□□□□ -0.72
TRAIP-206ENST00000477546 ATP6V0D2Q8N8Y2 350 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 Q8N9G6 341 aaPredicted RBP10.53□□□□□ -0.72
TRAIP-206ENST00000477546 CCDC112Q8NEF3 446 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 ZNF397Q8NF99 534 aaPredicted RBP10.53□□□□□ -0.72
TRAIP-206ENST00000477546 SLC39A13Q96H72 371 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 BTN2A3PQ96KV6 586 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 LURAP1Q96LR2 239 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 C11orf70Q9BRQ4 267 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 ASPSCR1Q9BZE9 553 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.53□□□□□ -0.72
TRAIP-206ENST00000477546 XPO7Q9UIA9 1087 aaKnown RBP10.53□□□□□ -0.72
TRAIP-206ENST00000477546 PILRAQ9UKJ1 303 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 PNMA8BQ9ULN7 279 aaPredicted RBP10.53□□□□□ -0.72
TRAIP-206ENST00000477546 STAP1Q9ULZ2 295 aa10.53□□□□□ -0.72
TRAIP-206ENST00000477546 ZNF106Q9H2Y7 1883 aaKnown RBP10.53□□□□□ -0.72
TRAIP-206ENST00000477546 F5H5T6 163 aa10.52□□□□□ -0.73
TRAIP-206ENST00000477546 ATP9BO43861 1147 aa10.52□□□□□ -0.73
TRAIP-206ENST00000477546 CYP1A1P04798 512 aaPredicted RBP10.52□□□□□ -0.73
TRAIP-206ENST00000477546 CELA2BP08218 269 aaPredicted RBP10.52□□□□□ -0.73
TRAIP-206ENST00000477546 ALPIP09923 528 aa10.52□□□□□ -0.73
TRAIP-206ENST00000477546 CCDC172P0C7W6 258 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms