RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 DSC1Q08554 894 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 TEFQ10587 303 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 COL9A2Q14055 689 aaPredicted RBP4.18□□□□□ -1.74
CD55-208ENST00000476590 GBX1Q14549 363 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 ZMYND11Q15326 602 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 RPS6KA1Q15418 735 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 TYSND1Q2T9J0 566 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 FBXO48Q5FWF7 155 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 RABGAP1LQ5R372 815 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 PDSS1Q5T2R2 415 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 ANKRD40Q6AI12 368 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 MRM1Q6IN84 353 aaKnown RBP4.18□□□□□ -1.74
CD55-208ENST00000476590 PYHIN1Q6K0P9 492 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 C16orf46Q6P387 395 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 C5orf46Q6UWT4 87 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 LINC00114Q6XXX2 140 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 ATG14Q6ZNE5 492 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 CENPUQ71F23 418 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 TRMT10CQ7L0Y3 403 aaKnown RBP4.18□□□□□ -1.74
CD55-208ENST00000476590 ZNF438Q7Z4V0 828 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 ZBTB33Q86T24 672 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 ASPGQ86U10 573 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 ZDHHC17Q8IUH5 632 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 CHERPQ8IWX8 916 aaKnown RBP4.18□□□□□ -1.74
CD55-208ENST00000476590 CPNE9Q8IYJ1 553 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 KLHL36Q8N4N3 616 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 CAMKK1Q8N5S9 505 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 PCSK9Q8NBP7 692 aaKnown RBP4.18□□□□□ -1.74
CD55-208ENST00000476590 OR6F1Q8NGZ6 308 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 OR8K5Q8NH50 307 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 SNAPC3Q92966 411 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 SUCLG2Q96I99 432 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 ZC3H10Q96K80 434 aaKnown RBP4.18□□□□□ -1.74
CD55-208ENST00000476590 TBATAQ96M53 351 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 PPM1MQ96MI6 270 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 TOX2Q96NM4 488 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 SLC4A9Q96Q91 983 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 SERPINI1Q99574 410 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 TRIM62Q9BVG3 475 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 ZNF416Q9BWM5 594 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 KLF16Q9BXK1 252 aaPredicted RBP4.18□□□□□ -1.74
CD55-208ENST00000476590 SLC19A3Q9BZV2 496 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.18□□□□□ -1.74
CD55-208ENST00000476590 SAV1Q9H4B6 383 aaPredicted RBP4.18□□□□□ -1.74
CD55-208ENST00000476590 NANOGQ9H9S0 305 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 AKIP1Q9NQ31 210 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 PCDHB16Q9NRJ7 776 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 NFKBIL1Q9UBC1 381 aaPredicted RBP4.18□□□□□ -1.74
CD55-208ENST00000476590 LRFN2Q9ULH4 789 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 PSMD13Q9UNM6 376 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 COPS3Q9UNS2 423 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 CTNND2Q9UQB3 1225 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 CRYL1Q9Y2S2 319 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 COL3A1P02461 1466 aaPredicted RBP4.18□□□□□ -1.74
CD55-208ENST00000476590 MRC2Q9UBG0 1479 aa4.18□□□□□ -1.74
CD55-208ENST00000476590 ZMYM2Q9UBW7 1377 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 MTMR11A4FU01 709 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 OR6C74A6NCV1 312 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 TARM1B6A8C7 271 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 TISP43B9A030 160 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 B9A039 149 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 TMX2-CTNND1H3BSU7 103 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 SGK1O00141 431 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 KCNK3O14649 394 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 GPR39O43194 453 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 ARHGEF9O43307 516 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 RBBP9O75884 186 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 FTCDO95954 541 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 GOT2P00505 430 aaKnown RBP4.17□□□□□ -1.74
CD55-208ENST00000476590 CHRNA1P02708 482 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 ALBP02768 609 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 RB1P06400 928 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 ASGR2P07307 311 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 NFICP08651 508 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 HBQ1P09105 142 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 HMOX1P09601 288 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 PHKG2P15735 406 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 IFNAR1P17181 557 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 HOXB8P17481 243 aaPredicted RBP4.17□□□□□ -1.74
CD55-208ENST00000476590 CCND2P30279 289 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 HOXC12P31275 282 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 DDOSTP39656 456 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 FNTBP49356 437 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 PRIM2P49643 509 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 SULT1E1P49888 294 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 RNF144AP50876 292 aaPredicted RBP4.17□□□□□ -1.74
CD55-208ENST00000476590 AFF1P51825 1210 aaKnown RBP4.17□□□□□ -1.74
CD55-208ENST00000476590 TMBIM6P55061 237 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 KCNJ10P78508 379 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 BST2Q10589 180 aaKnown RBP4.17□□□□□ -1.74
CD55-208ENST00000476590 COL9A3Q14050 684 aaPredicted RBP4.17□□□□□ -1.74
CD55-208ENST00000476590 CCNIQ14094 377 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 GK3PQ14409 553 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 PDK1Q15118 436 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 PPA1Q15181 289 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 TBCCQ15814 346 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 EXOC3L4Q17RC7 722 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 MINDY4Q4G0A6 757 aa4.17□□□□□ -1.74
CD55-208ENST00000476590 SETMARQ53H47 684 aaPredicted RBP4.17□□□□□ -1.74
CD55-208ENST00000476590 TDRD12Q587J7 1177 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms