RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 PGRMC1O00264 195 aaKnown RBP29.75■■■□□ 2.35
HOXB3-208ENST00000476342 RIOK3O14730 519 aaKnown RBP29.75■■■□□ 2.35
HOXB3-208ENST00000476342 FZD6O60353 706 aa29.75■■■□□ 2.35
HOXB3-208ENST00000476342 OPHN1O60890 802 aa29.75■■■□□ 2.35
HOXB3-208ENST00000476342 GNSP15586 552 aa29.75■■■□□ 2.35
HOXB3-208ENST00000476342 CD27P26842 260 aa29.75■■■□□ 2.35
HOXB3-208ENST00000476342 STIP1P31948 543 aaKnown RBP29.75■■■□□ 2.35
HOXB3-208ENST00000476342 EPHB1P54762 984 aa29.75■■■□□ 2.35
HOXB3-208ENST00000476342 IHHQ14623 411 aa29.75■■■□□ 2.35
HOXB3-208ENST00000476342 OASLQ15646 514 aaKnown RBP29.75■■■□□ 2.35
HOXB3-208ENST00000476342 SETMARQ53H47 684 aaPredicted RBP29.75■■■□□ 2.35
HOXB3-208ENST00000476342 PEAR1Q5VY43 1037 aaPredicted RBP29.75■■■□□ 2.35
HOXB3-208ENST00000476342 CXorf40AQ8TE69 158 aa29.75■■■□□ 2.35
HOXB3-208ENST00000476342 FCRL5Q96RD9 977 aa29.75■■■□□ 2.35
HOXB3-208ENST00000476342 GBA3Q9H227 469 aa29.75■■■□□ 2.35
HOXB3-208ENST00000476342 PCDH9Q9HC56 1237 aa29.75■■■□□ 2.35
HOXB3-208ENST00000476342 GGT7Q9UJ14 662 aa29.75■■■□□ 2.35
HOXB3-208ENST00000476342 ZNF148Q9UQR1 794 aa29.75■■■□□ 2.35
HOXB3-208ENST00000476342 CHKBQ9Y259 395 aa29.75■■■□□ 2.35
HOXB3-208ENST00000476342 A0A1W2PPC4 97 aa29.74■■■□□ 2.35
HOXB3-208ENST00000476342 SPINT1O43278 529 aa29.74■■■□□ 2.35
HOXB3-208ENST00000476342 LRP3O75074 770 aa29.74■■■□□ 2.35
HOXB3-208ENST00000476342 MAOBP27338 520 aa29.74■■■□□ 2.35
HOXB3-208ENST00000476342 MAT2AP31153 395 aaKnown RBP29.74■■■□□ 2.35
HOXB3-208ENST00000476342 FAM193AP78312 1265 aa29.74■■■□□ 2.35
HOXB3-208ENST00000476342 DRICH1Q6PGQ1 229 aaPredicted RBP29.74■■■□□ 2.35
HOXB3-208ENST00000476342 FAM71DQ8N9W8 422 aa29.74■■■□□ 2.35
HOXB3-208ENST00000476342 SPATA22Q8NHS9 363 aa29.74■■■□□ 2.35
HOXB3-208ENST00000476342 ACTRT1Q8TDG2 376 aa29.74■■■□□ 2.35
HOXB3-208ENST00000476342 COG1Q8WTW3 980 aa29.74■■■□□ 2.35
HOXB3-208ENST00000476342 VPS45Q9NRW7 570 aa29.74■■■□□ 2.35
HOXB3-208ENST00000476342 FAM153AQ9UHL3 310 aa29.74■■■□□ 2.35
HOXB3-208ENST00000476342 ZFHX2Q9C0A1 2572 aaPredicted RBP29.74■■■□□ 2.35
HOXB3-208ENST00000476342 C5orf60A6NFR6 353 aa29.73■■■□□ 2.35
HOXB3-208ENST00000476342 PRLRP16471 622 aa29.73■■■□□ 2.35
HOXB3-208ENST00000476342 MMP12P39900 470 aa29.73■■■□□ 2.35
HOXB3-208ENST00000476342 RPL26P61254 145 aaKnown RBP29.73■■■□□ 2.35
HOXB3-208ENST00000476342 SNX1Q13596 522 aa29.73■■■□□ 2.35
HOXB3-208ENST00000476342 TMEM52BQ4KMG9 183 aa29.73■■■□□ 2.35
HOXB3-208ENST00000476342 PAPD7Q5XG87 772 aaKnown RBP29.73■■■□□ 2.35
HOXB3-208ENST00000476342 TADA1Q96BN2 335 aa29.73■■■□□ 2.35
HOXB3-208ENST00000476342 MS4A14Q96JA4 679 aa29.73■■■□□ 2.35
HOXB3-208ENST00000476342 ADGRE3Q9BY15 652 aa29.73■■■□□ 2.35
HOXB3-208ENST00000476342 RPL26L1Q9UNX3 145 aaKnown RBP29.73■■■□□ 2.35
HOXB3-208ENST00000476342 ZFR2Q9UPR6 939 aaKnown RBP29.73■■■□□ 2.35
HOXB3-208ENST00000476342 GFRA3O60609 400 aa29.72■■■□□ 2.35
HOXB3-208ENST00000476342 MT-CYBP00156 380 aaPredicted RBP29.72■■■□□ 2.35
HOXB3-208ENST00000476342 PRKCGP05129 697 aa29.72■■■□□ 2.35
HOXB3-208ENST00000476342 PDHA1P08559 390 aa29.72■■■□□ 2.35
HOXB3-208ENST00000476342 ITIH2P19823 946 aa29.72■■■□□ 2.35
HOXB3-208ENST00000476342 PLA2G5P39877 138 aa29.72■■■□□ 2.35
HOXB3-208ENST00000476342 TMEM259Q4ZIN3 620 aa29.72■■■□□ 2.35
HOXB3-208ENST00000476342 ARHGEF18Q6ZSZ5 1173 aa29.72■■■□□ 2.35
HOXB3-208ENST00000476342 USP45Q70EL2 814 aa29.72■■■□□ 2.35
HOXB3-208ENST00000476342 CEP76Q8TAP6 659 aa29.72■■■□□ 2.35
HOXB3-208ENST00000476342 CCDC110Q8TBZ0 833 aa29.72■■■□□ 2.35
HOXB3-208ENST00000476342 PIH1D2Q8WWB5 315 aa29.72■■■□□ 2.35
HOXB3-208ENST00000476342 PPP1R2P1Q96PQ5 205 aa29.72■■■□□ 2.35
HOXB3-208ENST00000476342 TMEM74BQ9NUR3 256 aa29.72■■■□□ 2.35
HOXB3-208ENST00000476342 DMTF1Q9Y222 760 aa29.72■■■□□ 2.35
HOXB3-208ENST00000476342 SAR1BQ9Y6B6 198 aa29.72■■■□□ 2.35
HOXB3-208ENST00000476342 FRYLO94915 3013 aa29.72■■■□□ 2.35
HOXB3-208ENST00000476342 DOCK9Q9BZ29 2069 aa29.72■■■□□ 2.35
HOXB3-208ENST00000476342 ITGAVP06756 1048 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 CYP2A6P11509 494 aaPredicted RBP29.71■■■□□ 2.35
HOXB3-208ENST00000476342 TNNT3P45378 269 aaPredicted RBP29.71■■■□□ 2.35
HOXB3-208ENST00000476342 GDF10P55107 478 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 PCSK7Q16549 785 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 ZNF284Q2VY69 593 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 SEL1L3Q68CR1 1132 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 DPPA4Q7L190 304 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 RTP4Q96DX8 246 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 IFT43Q96FT9 208 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 UBP1Q9NZI7 540 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 PPIL1Q9Y3C6 166 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 PLXNA2O75051 1894 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 PRR5-ARHGAP8B1AHC4 643 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 PMPCBO75439 489 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 GCATO75600 419 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 ANXA9O76027 345 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 ACTN2P35609 894 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 GRIA4P48058 902 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 ETF1P62495 437 aaKnown RBP29.71■■■□□ 2.35
HOXB3-208ENST00000476342 CDK18Q07002 472 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 MPP3Q13368 585 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 PRPSAP1Q14558 356 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 DUOXA1Q1HG43 343 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 PLA2G2CQ5R387 149 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 ZCCHC9Q8N567 271 aaKnown RBP29.71■■■□□ 2.35
HOXB3-208ENST00000476342 LPCAT1Q8NF37 534 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 SCRN2Q96FV2 425 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 WRAP53Q9BUR4 548 aaKnown RBP29.71■■■□□ 2.35
HOXB3-208ENST00000476342 SLC17A9Q9BYT1 436 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 B4GALT6Q9UBX8 382 aa29.71■■■□□ 2.35
HOXB3-208ENST00000476342 PI4KAP42356 2102 aa29.7■■■□□ 2.35
HOXB3-208ENST00000476342 A0A1B0GTW7 788 aa29.7■■■□□ 2.34
HOXB3-208ENST00000476342 F5H423 210 aaPredicted RBP29.7■■■□□ 2.34
HOXB3-208ENST00000476342 BCAT2O15382 392 aaPredicted RBP29.7■■■□□ 2.34
HOXB3-208ENST00000476342 TM7SF2O76062 418 aa29.7■■■□□ 2.34
HOXB3-208ENST00000476342 PRLP01236 227 aa29.7■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms