RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 ANKRD66B4E2M5 251 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 TRIM24O15164 1050 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 PRPF4O43172 522 aaKnown RBP eCLIP13.81□□□□□ -0.21e-6■□□□□ 9.2
TRAF4-210ENST00000475329 FZD6O60353 706 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 SHOX2O60902 331 aaPredicted RBP13.81□□□□□ -0.2
TRAF4-210ENST00000475329 SIN3BO75182 1162 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 PGLSO95336 258 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 PIGNO95427 931 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 PRKCGP05129 697 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 ATP5BP06576 529 aaKnown RBP13.81□□□□□ -0.2
TRAF4-210ENST00000475329 SRPRAP08240 638 aaKnown RBP13.81□□□□□ -0.2
TRAF4-210ENST00000475329 PDHA1P08559 390 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 PIRTP0C851 137 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 LAMP2P13473 410 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 CHN1P15882 459 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 CREB1P16220 341 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 KRT4P19013 534 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 ARNTP27540 789 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 SERPINA4P29622 427 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 NNMTP40261 264 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 ARCN1P48444 511 aaKnown RBP13.81□□□□□ -0.2
TRAF4-210ENST00000475329 VASPP50552 380 aaPredicted RBP13.81□□□□□ -0.2
TRAF4-210ENST00000475329 EPHB1P54762 984 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 GNGT1P63211 74 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 RAD51Q06609 339 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 DNAJC3Q13217 504 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 BMPR2Q13873 1038 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 GRM2Q14416 872 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 GRM3Q14832 879 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 GRIN2CQ14957 1233 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 TAF1AQ15573 450 aaPredicted RBP13.81□□□□□ -0.2
TRAF4-210ENST00000475329 DLG2Q15700 870 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 CNGA3Q16281 694 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 QPCTQ16769 361 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 GAB4Q2WGN9 574 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 CARD16Q5EG05 197 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 TMEM215Q68D42 235 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 GLT6D1Q7Z4J2 308 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 STRA8Q7Z7C7 330 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 C12orf40Q86WS4 652 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 CNTN4Q8IWV2 1026 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 C4orf33Q8N1A6 199 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 PAF1Q8N7H5 531 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 OR6K2Q8NGY2 324 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 CALML6Q8TD86 181 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 STYXQ8WUJ0 223 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 MSLNLQ96KJ4 702 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 NECTIN4Q96NY8 510 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 AGAP2Q99490 1192 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 RBBP8Q99708 897 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 CIPCQ9C0C6 399 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 POMKQ9H5K3 350 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 NKIRAS1Q9NYS0 192 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 HACD3Q9P035 362 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 DEC1Q9P2X7 70 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 SLC8A2Q9UPR5 921 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 SPO11Q9Y5K1 396 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 PSAT1Q9Y617 370 aa13.81□□□□□ -0.2
TRAF4-210ENST00000475329 FAM47DPA6NHR8 397 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 SLC7A4O43246 635 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 HTRA2O43464 458 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-210ENST00000475329 SPAG7O75391 227 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 ECI2O75521 394 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 ITGA2BP08514 1039 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 PSMC3P17980 439 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 IGFBP4P22692 258 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 SPRP35270 261 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-210ENST00000475329 LTBRP36941 435 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 RECQLP46063 649 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-210ENST00000475329 CCNHP51946 323 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-210ENST00000475329 ZNF140P52738 457 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-210ENST00000475329 LIMK2P53671 638 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 PRAMEP78395 509 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 PDE1BQ01064 536 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 GUCY1A3Q02108 690 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 ACVR1Q04771 509 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 RUNX3Q13761 415 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 ADGRE1Q14246 886 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 UGP2Q16851 508 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 MYLK3Q32MK0 819 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 MROH9Q5TGP6 573 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 TIFABQ6ZNK6 161 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 MTSS1LQ765P7 747 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 CAMK1DQ8IU85 385 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 PLPP6Q8IY26 295 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 ANKRD42Q8N9B4 389 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 ST13P5Q8NFI4 369 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-210ENST00000475329 OR13J1Q8NGT2 312 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 MDM1Q8TC05 714 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 CYB5D2Q8WUJ1 264 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 SERAC1Q96JX3 654 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 MRGPRX3Q96LB0 322 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 CPEB1Q9BZB8 566 aaKnown RBP13.8□□□□□ -0.2
TRAF4-210ENST00000475329 PLA2G2FQ9BZM2 168 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 INTS9Q9NV88 658 aaKnown RBP13.8□□□□□ -0.2
TRAF4-210ENST00000475329 HECAQ9UBI9 543 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-210ENST00000475329 SLCO3A1Q9UIG8 710 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 GGT7Q9UJ14 662 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 PCDHB9Q9Y5E1 797 aa13.8□□□□□ -0.2
TRAF4-210ENST00000475329 ARL5AQ9Y689 179 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms