RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 RARRES1P49788 294 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 GPLD1P80108 840 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 PEX6Q13608 980 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 PIGHQ14442 188 aaPredicted RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 STEAP3Q658P3 488 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 PNCKQ6P2M8 343 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 RANBP10Q6VN20 620 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 VPS52Q8N1B4 723 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 C1orf52Q8N6N3 182 aaKnown RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 LILRB1Q8NHL6 650 aaPredicted RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 ZFAND1Q8TCF1 268 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 BSNDQ8WZ55 320 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 MCUR1Q96AQ8 359 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 COA7Q96BR5 231 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 AURKBQ96GD4 344 aaPredicted RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 WRNIP1Q96S55 665 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 GPR22Q99680 433 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 SLC30A3Q99726 388 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 SH3GL1Q99961 368 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 EFHD1Q9BUP0 239 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 CDADC1Q9BWV3 514 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 PLVAPQ9BX97 442 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 RUBCNLQ9H714 662 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 TMEM206Q9H813 350 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 IGSF5Q9NSI5 407 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 RAB20Q9NX57 234 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 CMTM6Q9NX76 183 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 DCDC2Q9UHG0 476 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 ANAPC7Q9UJX3 599 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 CARD8Q9Y2G2 431 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 LSM2Q9Y333 95 aaKnown RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 RAP2CQ9Y3L5 183 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 AP4S1Q9Y587 144 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 PSAT1Q9Y617 370 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 NPTNQ9Y639 398 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 SCINQ9Y6U3 715 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 SMIM23A6NLE4 172 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 UBFD1O14562 309 aaKnown RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 OPHN1O60890 802 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 FAM20BO75063 409 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 AVILO75366 819 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 CCDC159P0C7I6 412 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 KRT13P13646 458 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 IL2RBP14784 551 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 ATP2B4P23634 1241 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 PTPN6P29350 595 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 EPHX2P34913 555 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 HMGCLP35914 325 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 SLC26A3P40879 764 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 MATKP42679 507 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 GPD2P43304 727 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 MFAP3P55082 362 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 MAP4K2Q12851 820 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 GPS1Q13098 491 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 IL18R1Q13478 541 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 MTMR2Q13614 643 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 TRIP13Q15645 432 aaPredicted RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 TCHHL1Q5QJ38 904 aaPredicted RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 SV2AQ7L0J3 742 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 GPR141Q7Z602 305 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 ARMC8Q8IUR7 673 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 ANKRD52Q8NB46 1076 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 OR52H1Q8NGJ2 320 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 OR2T3Q8NH03 318 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 CEP70Q8NHQ1 597 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 AHCYL2Q96HN2 611 aaKnown RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 CNBD2Q96M20 576 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 ZNF578Q96N58 590 aaPredicted RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 FCRL3Q96P31 734 aaPredicted RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 RBBP8Q99708 897 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 CIB1Q99828 191 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 RTP3Q9BQQ7 232 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 TRIM45Q9H8W5 580 aaPredicted RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 COPS7BQ9H9Q2 264 aaPredicted RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.13□□□□□ -1.75
USP16-205ENST00000474835 LRRC4Q9HBW1 653 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 CCDC177Q9NQR7 707 aaPredicted RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 BFARQ9NZS9 450 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 VTI1BQ9UEU0 232 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 NDRG4Q9ULP0 352 aaKnown RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 PCDHGA10Q9Y5H3 936 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 TRIM49D1C9J1S8 452 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 CFAP99D6REC4 459 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 F8VP50 259 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 J3QRK9 145 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 M0R082 166 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 SPOPO43791 374 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 CIB2O75838 187 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 CD9P21926 228 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 TGM2P21980 687 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 HLA-DMAP28067 261 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 HOXA9P31269 272 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 LIMK2P53671 638 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 BASP1P80723 227 aaKnown RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 ARID5AQ03989 594 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 ZNF79Q15937 498 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 WDR45BQ5MNZ6 344 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 VWA5B1Q5TIE3 1220 aa4.13□□□□□ -1.75
USP16-205ENST00000474835 ZNF746Q6NUN9 644 aaPredicted RBP4.13□□□□□ -1.75
USP16-205ENST00000474835 CCDC81Q6ZN84 652 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms