RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 PENKP01210 267 aaPredicted RBP21.87■■□□□ 1.09
CCM2-206ENST00000474617 IRF1P10914 325 aa21.87■■□□□ 1.09
CCM2-206ENST00000474617 DLG2Q15700 870 aa21.87■■□□□ 1.09
CCM2-206ENST00000474617 METTL21CQ5VZV1 264 aa21.87■■□□□ 1.09
CCM2-206ENST00000474617 LILRA6Q6PI73 481 aa21.87■■□□□ 1.09
CCM2-206ENST00000474617 PACS2Q86VP3 889 aa21.87■■□□□ 1.09
CCM2-206ENST00000474617 CENPLQ8N0S6 344 aaPredicted RBP21.87■■□□□ 1.09
CCM2-206ENST00000474617 GPATCH11Q8N954 259 aa21.87■■□□□ 1.09
CCM2-206ENST00000474617 HDAC10Q969S8 669 aa21.87■■□□□ 1.09
CCM2-206ENST00000474617 ACDQ96AP0 544 aa21.87■■□□□ 1.09
CCM2-206ENST00000474617 OMDQ99983 421 aa21.87■■□□□ 1.09
CCM2-206ENST00000474617 C2orf49Q9BVC5 232 aaPredicted RBP21.87■■□□□ 1.09
CCM2-206ENST00000474617 DRC3Q9H069 523 aa21.87■■□□□ 1.09
CCM2-206ENST00000474617 NOD2Q9HC29 1040 aa21.87■■□□□ 1.09
CCM2-206ENST00000474617 MRGBPQ9NV56 204 aa21.87■■□□□ 1.09
CCM2-206ENST00000474617 NLE1Q9NVX2 485 aaPredicted RBP21.87■■□□□ 1.09
CCM2-206ENST00000474617 TRAV19A0A0A6YYK7 116 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 CCDC78A2IDD5 438 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 TARM1B6A8C7 271 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 CBX4O00257 560 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 TGM5O43548 720 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 GREM1O60565 184 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 TBL1XO60907 577 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 CNPP09543 421 aaKnown RBP21.86■■□□□ 1.09
CCM2-206ENST00000474617 T-ENOLP0DO92 83 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 TARSP26639 723 aaKnown RBP21.86■■□□□ 1.09
CCM2-206ENST00000474617 MNAT1P51948 309 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 TAS2R39P59534 338 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 RPL26P61254 145 aaKnown RBP21.86■■□□□ 1.09
CCM2-206ENST00000474617 AP1S1P61966 158 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 IRF9Q00978 393 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 IHHQ14623 411 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 CYTH1Q15438 398 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 SMAD1Q15797 465 aaKnown RBP21.86■■□□□ 1.09
CCM2-206ENST00000474617 SNCBQ16143 134 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 CES4AQ5XG92 561 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 RETSATQ6NUM9 610 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 AFTPHQ6ULP2 937 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 ZCCHC23Q6ZST2 131 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 PIWIL4Q7Z3Z4 852 aaKnown RBP21.86■■□□□ 1.09
CCM2-206ENST00000474617 ZNF557Q8N988 423 aaPredicted RBP21.86■■□□□ 1.09
CCM2-206ENST00000474617 BLOC1S5Q8TDH9 187 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 SCYL1Q96KG9 808 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 SORT1Q99523 831 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 ILKAPQ9H0C8 392 aaPredicted RBP21.86■■□□□ 1.09
CCM2-206ENST00000474617 ZNF334Q9HCZ1 680 aaPredicted RBP21.86■■□□□ 1.09
CCM2-206ENST00000474617 VTI1BQ9UEU0 232 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 ZMYM5Q9UJ78 669 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 VWA7Q9Y334 891 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 CPQQ9Y646 472 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 MYLKQ15746 1914 aa21.86■■□□□ 1.09
CCM2-206ENST00000474617 NPHS1O60500 1241 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 ZMPSTE24O75844 475 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 WFS1O76024 890 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 FGBP02675 491 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 LTA4HP09960 611 aaKnown RBP21.85■■□□□ 1.09
CCM2-206ENST00000474617 ITGB8P26012 769 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 HNRNPH1P31943 449 aaKnown RBP21.85■■□□□ 1.09
CCM2-206ENST00000474617 SCNN1BP51168 640 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 PRKAA1Q13131 559 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 CDH18Q13634 790 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 ACAP2Q15057 778 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 TYSND1Q2T9J0 566 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 MPPE1Q53F39 396 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 TNS4Q8IZW8 715 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 ARHGAP24Q8N264 748 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 FSTL5Q8N475 847 aaPredicted RBP21.85■■□□□ 1.09
CCM2-206ENST00000474617 PTCD3Q96EY7 689 aaKnown RBP21.85■■□□□ 1.09
CCM2-206ENST00000474617 RILPQ96NA2 401 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 GPR78Q96P69 363 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 FEM1AQ9BSK4 669 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 TMEM106CQ9BVX2 250 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 CATSPERZQ9NTU4 200 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 SH3BP1Q9Y3L3 701 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 RAP2CQ9Y3L5 183 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 CD3EAPO15446 510 aaKnown RBP21.85■■□□□ 1.09
CCM2-206ENST00000474617 PHGDHO43175 533 aaKnown RBP21.85■■□□□ 1.09
CCM2-206ENST00000474617 S1PR4O95977 384 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 ATP5F1P24539 256 aaPredicted RBP21.85■■□□□ 1.09
CCM2-206ENST00000474617 GABRR2P28476 465 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 CSNK1DP48730 415 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 RCN2Q14257 317 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 HECTD2Q5U5R9 776 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 SLC22A9Q8IVM8 553 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 TMEM151AQ8N4L1 468 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 ARL14EPQ8N8R7 260 aaPredicted RBP21.85■■□□□ 1.09
CCM2-206ENST00000474617 OR52K2Q8NGK3 314 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 OR4L1Q8NH43 312 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 KCTD4Q8WVF5 259 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 C20orf27Q9GZN8 174 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 MMADHCQ9H3L0 296 aaPredicted RBP21.85■■□□□ 1.09
CCM2-206ENST00000474617 FBXO6Q9NRD1 293 aaPredicted RBP21.85■■□□□ 1.09
CCM2-206ENST00000474617 ZNF358Q9NW07 568 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 NCKIPSDQ9NZQ3 722 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 DNMT3BQ9UBC3 853 aaKnown RBP21.85■■□□□ 1.09
CCM2-206ENST00000474617 VPS28Q9UK41 221 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 OR51B4Q9Y5P0 310 aa21.85■■□□□ 1.09
CCM2-206ENST00000474617 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.84■■□□□ 1.09
CCM2-206ENST00000474617 TMCC1O94876 653 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 CXCL14O95715 111 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms