RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 C6P13671 934 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 NME1P15531 152 aaKnown RBP11.26□□□□□ -0.61
CKS1B-206ENST00000474215 CKMT2P17540 419 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 CR2P20023 1033 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 IGFALSP35858 605 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 MMP12P39900 470 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 MMP13P45452 471 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 SEMG2Q02383 582 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 GALNT2Q10471 571 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 AGERQ15109 404 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 SMAD1Q15797 465 aaKnown RBP11.26□□□□□ -0.61
CKS1B-206ENST00000474215 WSCD2Q2TBF2 565 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 PROX2Q3B8N5 592 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 HS1BP3Q53T59 392 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 RALGPS1Q5JS13 557 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 TPRG1LQ5T0D9 272 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 ZFYVE27Q5T4F4 411 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 NCBP2-AS2Q69YL0 99 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 DHRS13Q6UX07 377 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 KDM7AQ6ZMT4 941 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 RHOT2Q8IXI1 618 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 TEX26Q8N6G2 289 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 OR4C6Q8NH72 309 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 SPOCK2Q92563 424 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 MGME1Q9BQP7 344 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 CAAP1Q9H8G2 361 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 NOD2Q9HC29 1040 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 SCUBE2Q9NQ36 999 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 INTUQ9ULD6 942 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 COQ6Q9Y2Z9 468 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 PCDHGC4Q9Y5F7 938 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 EPG5Q9HCE0 2579 aa11.26□□□□□ -0.61
CKS1B-206ENST00000474215 COL5A1P20908 1838 aaPredicted RBP11.25□□□□□ -0.61
CKS1B-206ENST00000474215 H3BM21 787 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 MATN3O15232 486 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 FFAR2O15552 330 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 HTRA2O43464 458 aaPredicted RBP11.25□□□□□ -0.61
CKS1B-206ENST00000474215 MFSD11O43934 449 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 SOCS5O75159 536 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 RFPL3O75679 317 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 GIMD1P0DJR0 217 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 ALPPL2P10696 532 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 JUNDP17535 347 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 KDELR1P24390 212 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 CCNCP24863 283 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 GARSP41250 739 aaKnown RBP11.25□□□□□ -0.61
CKS1B-206ENST00000474215 ACADVLP49748 655 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 PEX5P50542 639 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 EIF2B5Q13144 721 aaKnown RBP11.25□□□□□ -0.61
CKS1B-206ENST00000474215 ILKQ13418 452 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 INPP5AQ14642 412 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 TCEAL1Q15170 157 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 IRF4Q15306 451 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 IFI16Q16666 785 aaKnown RBP11.25□□□□□ -0.61
CKS1B-206ENST00000474215 LIPIQ6XZB0 460 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 DPPA4Q7L190 304 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 TMPRSS12Q86WS5 348 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 PQLC3Q8N755 202 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 TC2NQ8N9U0 490 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 BTN2A2Q8WVV5 523 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 RFFLQ8WZ73 363 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 RAPGEF5Q92565 580 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 FATE1Q969F0 183 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 FAF2Q96CS3 445 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 TSGA13Q96PP4 275 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 NLGN3Q9NZ94 848 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 KLF15Q9UIH9 416 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 CSNK1G3Q9Y6M4 447 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 TRPM6Q9BX84 2022 aa11.25□□□□□ -0.61
CKS1B-206ENST00000474215 A8MX80 341 aa11.24□□□□□ -0.61
CKS1B-206ENST00000474215 ZNF487B1APH4 448 aa11.24□□□□□ -0.61
CKS1B-206ENST00000474215 K7ESM1 405 aa11.24□□□□□ -0.61
CKS1B-206ENST00000474215 RECQL5O94762 991 aaPredicted RBP11.24□□□□□ -0.61
CKS1B-206ENST00000474215 ELFN1P0C7U0 828 aa11.24□□□□□ -0.61
CKS1B-206ENST00000474215 MX2P20592 715 aa11.24□□□□□ -0.61
CKS1B-206ENST00000474215 CES1P23141 567 aa11.24□□□□□ -0.61
CKS1B-206ENST00000474215 ACP1P24666 158 aa11.24□□□□□ -0.61
CKS1B-206ENST00000474215 SLC1A1P43005 524 aa11.24□□□□□ -0.61
CKS1B-206ENST00000474215 MAXP61244 160 aa11.24□□□□□ -0.61
CKS1B-206ENST00000474215 RALGDSQ12967 914 aa11.24□□□□□ -0.61
CKS1B-206ENST00000474215 LRRC38Q5VT99 294 aa11.24□□□□□ -0.61
CKS1B-206ENST00000474215 TIGD7Q6NT04 549 aaPredicted RBP11.24□□□□□ -0.61
CKS1B-206ENST00000474215 ZNF548Q8NEK5 533 aaPredicted RBP11.24□□□□□ -0.61
CKS1B-206ENST00000474215 PDCD6IPQ8WUM4 868 aaKnown RBP11.24□□□□□ -0.61
CKS1B-206ENST00000474215 MAML1Q92585 1016 aa11.24□□□□□ -0.61
CKS1B-206ENST00000474215 RNF157Q96PX1 679 aa11.24□□□□□ -0.61
CKS1B-206ENST00000474215 APOOQ9BUR5 198 aa11.24□□□□□ -0.61
CKS1B-206ENST00000474215 DUSP23Q9BVJ7 150 aa11.24□□□□□ -0.61
CKS1B-206ENST00000474215 RBSNQ9H1K0 784 aa11.24□□□□□ -0.61
CKS1B-206ENST00000474215 NT5MQ9NPB1 228 aa11.24□□□□□ -0.61
CKS1B-206ENST00000474215 SPEGQ15772 3267 aa11.24□□□□□ -0.61
CKS1B-206ENST00000474215 KMT2BQ9UMN6 2715 aaPredicted RBP11.24□□□□□ -0.61
CKS1B-206ENST00000474215 TP53BP1Q12888 1972 aaPredicted RBP11.23□□□□□ -0.61
CKS1B-206ENST00000474215 LRRD1A4D1F6 860 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 FAM149AA5PLN7 773 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 C3orf70A6NLC5 250 aaPredicted RBP11.23□□□□□ -0.61
CKS1B-206ENST00000474215 AQP9O43315 295 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 NEBLO76041 1014 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 MAP3K6O95382 1288 aa11.23□□□□□ -0.61
CKS1B-206ENST00000474215 LCA5LO95447 670 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms