RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CFAP69A5D8W1 941 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 IGLON5A6NGN9 336 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 F5H423 210 aaPredicted RBP12.49□□□□□ -0.41
DDX56-209ENST00000473924 BCAT2O15382 392 aaPredicted RBP12.49□□□□□ -0.41
DDX56-209ENST00000473924 SLC31A1O15431 190 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 LATO43561 262 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 MMP20O60882 483 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 MMP2P08253 660 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 PDHA1P08559 390 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 ZNF806P0C7X5 589 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 PRLRP16471 622 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 NFKB1P19838 968 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 SKOR1P84550 965 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 SEMG2Q02383 582 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 SNX1Q13596 522 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 TEAD4Q15561 434 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 CSRP2Q16527 193 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 PCSK7Q16549 785 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 TRIM61Q5EBN2 209 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 PLA2G2CQ5R387 149 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 PEAR1Q5VY43 1037 aaPredicted RBP12.49□□□□□ -0.41
DDX56-209ENST00000473924 USP45Q70EL2 814 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 KDELC2Q7Z4H8 507 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 SPATA22Q8NHS9 363 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 SLC35B2Q8TB61 432 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 IFT43Q96FT9 208 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 OSBPL9Q96SU4 736 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 TMEM121Q9BTD3 319 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 TDRD1Q9BXT4 1180 aaKnown RBP12.49□□□□□ -0.41
DDX56-209ENST00000473924 ADGRE3Q9BY15 652 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 SLC17A9Q9BYT1 436 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 EBF2Q9HAK2 575 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 PCDH9Q9HC56 1237 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 TM9SF3Q9HD45 589 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 UBP1Q9NZI7 540 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 ZFR2Q9UPR6 939 aaKnown RBP12.49□□□□□ -0.41
DDX56-209ENST00000473924 ZNF148Q9UQR1 794 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 DMTF1Q9Y222 760 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 MYO15AQ9UKN7 3530 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 ZFHX2Q9C0A1 2572 aaPredicted RBP12.49□□□□□ -0.41
DDX56-209ENST00000473924 RALGAPA1Q6GYQ0 2036 aa12.49□□□□□ -0.41
DDX56-209ENST00000473924 A8MX80 341 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 PATE3B3GLJ2 98 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 PRAMEF26H0Y7S4 382 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 SPINT1O43278 529 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 LIASO43766 372 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 FOXD2O60548 495 aaPredicted RBP12.48□□□□□ -0.41
DDX56-209ENST00000473924 PMPCBO75439 489 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 TM7SF2O76062 418 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 PAK4O96013 591 aaPredicted RBP12.48□□□□□ -0.41
DDX56-209ENST00000473924 MT-CYBP00156 380 aaPredicted RBP12.48□□□□□ -0.41
DDX56-209ENST00000473924 CYP2A6P11509 494 aaPredicted RBP12.48□□□□□ -0.41
DDX56-209ENST00000473924 CTPS1P17812 591 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 AKT2P31751 481 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 CD68P34810 354 aaPredicted RBP12.48□□□□□ -0.41
DDX56-209ENST00000473924 MMP12P39900 470 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 LIG3P49916 1009 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 AFF3P51826 1226 aaKnown RBP12.48□□□□□ -0.41
DDX56-209ENST00000473924 RACK1P63244 317 aaKnown RBP12.48□□□□□ -0.41
DDX56-209ENST00000473924 PRPSAP1Q14558 356 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 STAT4Q14765 748 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 SF3A2Q15428 464 aaKnown RBP12.48□□□□□ -0.41
DDX56-209ENST00000473924 ZNF284Q2VY69 593 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 TMEM52BQ4KMG9 183 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 AASDHQ4L235 1098 aaPredicted RBP12.48□□□□□ -0.41
DDX56-209ENST00000473924 TMEM259Q4ZIN3 620 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 ANKRD20A2Q5SQ80 823 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 ANKRD20A1Q5TYW2 823 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 ANKRD20A3Q5VUR7 823 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 TCEAL6Q6IPX3 200 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 NAPEPLDQ6IQ20 393 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 CCDC70Q6NSX1 233 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 SLC23A3Q6PIS1 610 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 ARHGEF18Q6ZSZ5 1173 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 C17orf53Q8N3J3 647 aaPredicted RBP12.48□□□□□ -0.41
DDX56-209ENST00000473924 FAM71DQ8N9W8 422 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 LPCAT1Q8NF37 534 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 CCDC110Q8TBZ0 833 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 PIH1D2Q8WWB5 315 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 SPOCK2Q92563 424 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 TCEAL3Q969E4 200 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 SKA1Q96BD8 255 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 RMDN1Q96DB5 314 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 SCRN2Q96FV2 425 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 SLC6A18Q96N87 628 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 SPATA13Q96N96 652 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 FCRL5Q96RD9 977 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 NAP1L3Q99457 506 aaPredicted RBP12.48□□□□□ -0.41
DDX56-209ENST00000473924 MYOCQ99972 504 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 C1QTNF7Q9BXJ2 289 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 GBA3Q9H227 469 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 USP29Q9HBJ7 922 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 PARD6AQ9NPB6 346 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 KCND1Q9NSA2 647 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 B4GALT6Q9UBX8 382 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 FAM153AQ9UHL3 310 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 SNX12Q9UMY4 172 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 SLC6A14Q9UN76 642 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 ZKSCAN5Q9Y2L8 839 aa12.48□□□□□ -0.41
DDX56-209ENST00000473924 GPR179Q6PRD1 2367 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms