RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 METTL5Q9NRN9 209 aaKnown RBP12.73□□□□□ -0.37
TRAF4-209ENST00000473421 TMEM248Q9NWD8 314 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 LHX3Q9UBR4 397 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 DAAM1Q9Y4D1 1078 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 FHOD1Q9Y613 1164 aa12.73□□□□□ -0.37
TRAF4-209ENST00000473421 RIOK3O14730 519 aaKnown RBP12.72□□□□□ -0.37
TRAF4-209ENST00000473421 BUB1O43683 1085 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 FUCA1P04066 466 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 PCCBP05166 539 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 MMEP08473 750 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 ALPIP09923 528 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 RHOQP17081 205 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 GM2AP17900 193 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 SCNN1AP37088 669 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 PPP1R2P41236 205 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 B4GALNT1Q00973 533 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 CERCAMQ5T4B2 595 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 NAA35Q5VZE5 725 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 ZSCAN30Q86W11 494 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 ELOA2Q8IYF1 753 aaPredicted RBP12.72□□□□□ -0.37
TRAF4-209ENST00000473421 RCBTB1Q8NDN9 531 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 FAM46DQ8NEK8 389 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 SLC20A1Q8WUM9 679 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 PTCD2Q8WV60 388 aaKnown RBP12.72□□□□□ -0.37
TRAF4-209ENST00000473421 RXFP2Q8WXD0 754 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 NSMCE3Q96MG7 304 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 TMEM74Q96NL1 305 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 LGR4Q9BXB1 951 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 OSBPL1AQ9BXW6 950 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 SLC25A18Q9H1K4 315 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 EPN3Q9H201 632 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 GEMIN8Q9NWZ8 242 aaKnown RBP12.72□□□□□ -0.37
TRAF4-209ENST00000473421 ANKMY1Q9P2S6 941 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 LRIT1Q9P2V4 623 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 DKK3Q9UBP4 350 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 KLQ9UEF7 1012 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 APPL1Q9UKG1 709 aa12.72□□□□□ -0.37
TRAF4-209ENST00000473421 B4DGG1 531 aa12.71□□□□□ -0.37
TRAF4-209ENST00000473421 PLEKP08567 350 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-209ENST00000473421 RGRP47804 291 aa12.71□□□□□ -0.37
TRAF4-209ENST00000473421 MAPKAPK2P49137 400 aa12.71□□□□□ -0.37
TRAF4-209ENST00000473421 LIG3P49916 1009 aa12.71□□□□□ -0.37
TRAF4-209ENST00000473421 PEX5P50542 639 aa12.71□□□□□ -0.37
TRAF4-209ENST00000473421 MAZP56270 477 aaKnown RBP12.71□□□□□ -0.37
TRAF4-209ENST00000473421 HDAC4P56524 1084 aa12.71□□□□□ -0.37
TRAF4-209ENST00000473421 OR1D5P58170 312 aa12.71□□□□□ -0.37
TRAF4-209ENST00000473421 NOMO3P69849 1222 aa12.71□□□□□ -0.37
TRAF4-209ENST00000473421 NRG1Q02297 640 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-209ENST00000473421 HLTFQ14527 1009 aaKnown RBP eCLIP12.71□□□□□ -0.37
TRAF4-209ENST00000473421 HSP90AA4PQ58FG1 418 aa12.71□□□□□ -0.37
TRAF4-209ENST00000473421 PHF19Q5T6S3 580 aa12.71□□□□□ -0.37
TRAF4-209ENST00000473421 GKN2Q86XP6 184 aa12.71□□□□□ -0.37
TRAF4-209ENST00000473421 SCG3Q8WXD2 468 aaKnown RBP12.71□□□□□ -0.37
TRAF4-209ENST00000473421 ARHGEF26Q96DR7 871 aa12.71□□□□□ -0.37
TRAF4-209ENST00000473421 HMCESQ96FZ2 354 aa12.71□□□□□ -0.37
TRAF4-209ENST00000473421 GDAP1L1Q96MZ0 367 aa12.71□□□□□ -0.37
TRAF4-209ENST00000473421 NUDT22Q9BRQ3 303 aa12.71□□□□□ -0.37
TRAF4-209ENST00000473421 MAGEH1Q9H213 219 aa12.71□□□□□ -0.37
TRAF4-209ENST00000473421 SPATS2LQ9NUQ6 558 aaKnown RBP12.71□□□□□ -0.37
TRAF4-209ENST00000473421 MFHAS1Q9Y4C4 1052 aa12.71□□□□□ -0.37
TRAF4-209ENST00000473421 ST14Q9Y5Y6 855 aa12.71□□□□□ -0.37
TRAF4-209ENST00000473421 TEX15Q9BXT5 2789 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 GTPBP10A4D1E9 387 aaKnown RBP12.7□□□□□ -0.38
TRAF4-209ENST00000473421 RAMP2O60895 175 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 FGF3P11487 239 aaPredicted RBP12.7□□□□□ -0.38
TRAF4-209ENST00000473421 GLB1P16278 677 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 CHRNB2P17787 502 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 BLKP51451 505 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 SNX16P57768 344 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 RHOAP61586 193 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 RALGDSQ12967 914 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 RAPGEF1Q13905 1077 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 UGP2Q16851 508 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 AMZ1Q400G9 498 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 MIIPQ5JXC2 388 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 HIST2H2BCQ6DN03 193 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 XKR5Q6UX68 686 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 TAF8Q7Z7C8 310 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 NRROSQ86YC3 692 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 CAMK1DQ8IU85 385 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 SLC30A5Q8TAD4 765 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 PATE1Q8WXA2 126 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 NKD1Q969G9 470 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 FAM81BQ96LP2 452 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 WDR92Q96MX6 357 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 NAA15Q9BXJ9 866 aaKnown RBP12.7□□□□□ -0.38
TRAF4-209ENST00000473421 PDCL3Q9H2J4 239 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 RWDD2AQ9UIY3 292 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 HOOK1Q9UJC3 728 aaKnown RBP12.7□□□□□ -0.38
TRAF4-209ENST00000473421 PAXBP1Q9Y5B6 917 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 DGKBQ9Y6T7 804 aa12.7□□□□□ -0.38
TRAF4-209ENST00000473421 LRRK2Q5S007 2527 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 CXorf51AA0A1B0GTR3 108 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 A0A1W2PQC6 194 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 TSPAN11A1L157 253 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 C2CD4BA6NLJ0 364 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 A8MX80 341 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 TMX2-CTNND1H3BSU7 103 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 J3KR12 359 aa12.69□□□□□ -0.38
TRAF4-209ENST00000473421 TOR1BO14657 336 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms