RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 HCAR2Q8TDS4 363 aa11.62□□□□□ -0.55
CPNE1-222ENST00000473373 SAP25Q8TEE9 199 aa11.62□□□□□ -0.55
CPNE1-222ENST00000473373 ZNF670Q9BS34 389 aa11.62□□□□□ -0.55
CPNE1-222ENST00000473373 ATP8A1Q9Y2Q0 1164 aa11.62□□□□□ -0.55
CPNE1-222ENST00000473373 ZFYVE26Q68DK2 2539 aa11.62□□□□□ -0.55
CPNE1-222ENST00000473373 PLXNB3Q9ULL4 1909 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 TTC24A2A3L6 582 aaPredicted RBP11.61□□□□□ -0.55
CPNE1-222ENST00000473373 TAF4O00268 1085 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 RAD51BO15315 384 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 CBFA2T3O75081 653 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 CPP00450 1065 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 CYP2A6P11509 494 aaPredicted RBP11.61□□□□□ -0.55
CPNE1-222ENST00000473373 C6P13671 934 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 JUNDP17535 347 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 MX2P20592 715 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 CA4P22748 312 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 HTR1BP28222 390 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 MAN1A1P33908 653 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 ARHGAP25P42331 645 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 MAGEA1P43355 309 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 RXRGP48443 463 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 TAS2R40P59535 323 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 NSUN2Q08J23 767 aaKnown RBP eCLIP11.61□□□□□ -0.55
CPNE1-222ENST00000473373 ARHGEF7Q14155 803 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 FGL2Q14314 439 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 LRRC14Q15048 493 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 ACOX1Q15067 660 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 IFI16Q16666 785 aaKnown RBP11.61□□□□□ -0.55
CPNE1-222ENST00000473373 FAXCQ5TGI0 409 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 ABI3BPQ7Z7G0 1075 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 GLRX5Q86SX6 157 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 CPNE8Q86YQ8 564 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 LRRC49Q8IUZ0 686 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 GALNT15Q8N3T1 639 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 ADAMTS14Q8WXS8 1223 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 LENG8Q96PV6 779 aaPredicted RBP11.61□□□□□ -0.55
CPNE1-222ENST00000473373 PSKH2Q96QS6 385 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 C1QTNF2Q9BXJ5 285 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 SLC13A1Q9BZW2 595 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 MOSPD1Q9UJG1 213 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 HEY1Q9Y5J3 304 aa11.61□□□□□ -0.55
CPNE1-222ENST00000473373 ARID1BQ8NFD5 2236 aaPredicted RBP11.61□□□□□ -0.55
CPNE1-222ENST00000473373 A0A1W2PQ67 120 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 RIOK3O14730 519 aaKnown RBP11.6□□□□□ -0.55
CPNE1-222ENST00000473373 APOL1O14791 398 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 AREL1O15033 823 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 BUB1BO60566 1050 aaPredicted RBP11.6□□□□□ -0.55
CPNE1-222ENST00000473373 MAFKO60675 156 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 RFPL3O75679 317 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 CTSEP14091 401 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 KDELR1P24390 212 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 HNF1BP35680 557 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 IGFALSP35858 605 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 GARSP41250 739 aaKnown RBP11.6□□□□□ -0.55
CPNE1-222ENST00000473373 LIG3P49916 1009 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 ZNF75DP51815 510 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 DYNLT1P63172 113 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 AP1B1Q10567 949 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 DNAJC3Q13217 504 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 IRF4Q15306 451 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 SHBQ15464 509 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 ASTE1Q2TB18 679 aaPredicted RBP11.6□□□□□ -0.55
CPNE1-222ENST00000473373 TMEM52BQ4KMG9 183 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 ARMC12Q5T9G4 340 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 NCBP2-AS2Q69YL0 99 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 C19orf48Q6RUI8 117 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 DHRS13Q6UX07 377 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 DBX2Q6ZNG2 339 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 RD3Q7Z3Z2 195 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 SLCO6A1Q86UG4 719 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 CCDC50Q8IVM0 306 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 RHOT1Q8IXI2 618 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 ATL2Q8NHH9 583 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 LMX1AQ8TE12 382 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 BTN2A2Q8WVV5 523 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 ASB12Q8WXK4 309 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 BMFQ96LC9 184 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 NUDCD1Q96RS6 583 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 IL12RB2Q99665 862 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 POLR1EQ9GZS1 481 aaKnown RBP11.6□□□□□ -0.55
CPNE1-222ENST00000473373 RBSNQ9H1K0 784 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 DDX56Q9NY93 547 aaKnown RBP11.6□□□□□ -0.55
CPNE1-222ENST00000473373 SEPT10Q9P0V9 454 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 APOBEC3BQ9UH17 382 aaKnown RBP11.6□□□□□ -0.55
CPNE1-222ENST00000473373 INTUQ9ULD6 942 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 NENFQ9UMX5 172 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 HYOU1Q9Y4L1 999 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 PCDHGC4Q9Y5F7 938 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 LRP4O75096 1905 aa11.6□□□□□ -0.55
CPNE1-222ENST00000473373 NBEAQ8NFP9 2946 aa11.59□□□□□ -0.55
CPNE1-222ENST00000473373 SPTY2D1-AS1A0A0U1RR47 76 aa11.59□□□□□ -0.55
CPNE1-222ENST00000473373 MUSKO15146 869 aa11.59□□□□□ -0.55
CPNE1-222ENST00000473373 SOCS5O75159 536 aa11.59□□□□□ -0.55
CPNE1-222ENST00000473373 PIAS2O75928 621 aa11.59□□□□□ -0.55
CPNE1-222ENST00000473373 JUPP14923 745 aa11.59□□□□□ -0.55
CPNE1-222ENST00000473373 ZFXP17010 805 aaPredicted RBP11.59□□□□□ -0.55
CPNE1-222ENST00000473373 DGKAP23743 735 aa11.59□□□□□ -0.55
CPNE1-222ENST00000473373 MMP12P39900 470 aa11.59□□□□□ -0.55
CPNE1-222ENST00000473373 SLC1A1P43005 524 aa11.59□□□□□ -0.55
CPNE1-222ENST00000473373 BLKP51451 505 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms