RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 C1SP09871 688 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 NME1P15531 152 aaKnown RBP22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 ARHGAP25P42331 645 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 MMP13P45452 471 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 ACADVLP49748 655 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 LIG3P49916 1009 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 YPEL5P62699 121 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 POLR2LP62875 67 aaKnown RBP22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 PTK2BQ14289 1009 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 IRF4Q15306 451 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 HS1BP3Q53T59 392 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 TPRG1LQ5T0D9 272 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 ZFYVE27Q5T4F4 411 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 MARC1Q5VT66 337 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 CCNI2Q6ZMN8 369 aaPredicted RBP22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 GALNT15Q8N3T1 639 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 PGBD5Q8N414 524 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 OR4C6Q8NH72 309 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 RFFLQ8WZ73 363 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 FAF2Q96CS3 445 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 SCUBE2Q9NQ36 999 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 ASPMQ8IZT6 3477 aa22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 TTC24A2A3L6 582 aaPredicted RBP22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 TRIM38O00635 465 aa22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 SIGLEC6O43699 453 aa22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 CDK4P11802 303 aa22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 CKMT2P17540 419 aa22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 GARSP41250 739 aaKnown RBP22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 THOP1P52888 689 aa22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 GALNT2Q10471 571 aa22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 ZNF211Q13398 564 aaPredicted RBP22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 LRRC14Q15048 493 aa22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 AGERQ15109 404 aa22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 PROX2Q3B8N5 592 aa22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 RALGPS1Q5JS13 557 aa22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 DHRS13Q6UX07 377 aa22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 KDF1Q8NAX2 398 aaPredicted RBP22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 CAAP1Q9H8G2 361 aa22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 INTUQ9ULD6 942 aa22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 KMT2BQ9UMN6 2715 aaPredicted RBP22.69■■□□□ 1.22
PTP4A1-203ENST00000473334 USP24Q9UPU5 2620 aa22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 A0A1W2PQ67 120 aa22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 CFAP69A5D8W1 941 aa22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 NEMP2A6NFY4 417 aa22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 FFAR2O15552 330 aa22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 HTRA2O43464 458 aaPredicted RBP22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 LZTS3O60299 673 aaPredicted RBP22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 ALPPL2P10696 532 aa22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 MAXP61244 160 aa22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 SEMG2Q02383 582 aa22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 RALGDSQ12967 914 aa22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 EIF2B5Q13144 721 aaKnown RBP22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 SMAD1Q15797 465 aaKnown RBP22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 WSCD2Q2TBF2 565 aa22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 TIGD7Q6NT04 549 aaPredicted RBP22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 DPPA4Q7L190 304 aa22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 TEX26Q8N6G2 289 aa22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 TC2NQ8N9U0 490 aa22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 SPOCK2Q92563 424 aa22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 NOD2Q9HC29 1040 aa22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 NLGN3Q9NZ94 848 aa22.68■■□□□ 1.22
PTP4A1-203ENST00000473334 SCAMP1O15126 338 aa22.67■■□□□ 1.22
PTP4A1-203ENST00000473334 ELFN1P0C7U0 828 aa22.67■■□□□ 1.22
PTP4A1-203ENST00000473334 GIMD1P0DJR0 217 aa22.67■■□□□ 1.22
PTP4A1-203ENST00000473334 KDELR1P24390 212 aa22.67■■□□□ 1.22
PTP4A1-203ENST00000473334 ILKQ13418 452 aa22.67■■□□□ 1.22
PTP4A1-203ENST00000473334 MACC1Q6ZN28 852 aa22.67■■□□□ 1.22
PTP4A1-203ENST00000473334 PQLC3Q8N755 202 aa22.67■■□□□ 1.22
PTP4A1-203ENST00000473334 ZNF548Q8NEK5 533 aaPredicted RBP22.67■■□□□ 1.22
PTP4A1-203ENST00000473334 RAPGEF5Q92565 580 aa22.67■■□□□ 1.22
PTP4A1-203ENST00000473334 NT5MQ9NPB1 228 aa22.67■■□□□ 1.22
PTP4A1-203ENST00000473334 KLF15Q9UIH9 416 aa22.67■■□□□ 1.22
PTP4A1-203ENST00000473334 PCDHGC4Q9Y5F7 938 aa22.67■■□□□ 1.22
PTP4A1-203ENST00000473334 MAP3K6O95382 1288 aa22.66■■□□□ 1.22
PTP4A1-203ENST00000473334 CPP00450 1065 aa22.66■■□□□ 1.22
PTP4A1-203ENST00000473334 JUNDP17535 347 aa22.66■■□□□ 1.22
PTP4A1-203ENST00000473334 ACP1P24666 158 aa22.66■■□□□ 1.22
PTP4A1-203ENST00000473334 TCEAL1Q15170 157 aa22.66■■□□□ 1.22
PTP4A1-203ENST00000473334 IFI16Q16666 785 aaKnown RBP22.66■■□□□ 1.22
PTP4A1-203ENST00000473334 LIPIQ6XZB0 460 aa22.66■■□□□ 1.22
PTP4A1-203ENST00000473334 PDCD6IPQ8WUM4 868 aaKnown RBP22.66■■□□□ 1.22
PTP4A1-203ENST00000473334 BTN2A2Q8WVV5 523 aa22.66■■□□□ 1.22
PTP4A1-203ENST00000473334 MAML1Q92585 1016 aa22.66■■□□□ 1.22
PTP4A1-203ENST00000473334 FATE1Q969F0 183 aa22.66■■□□□ 1.22
PTP4A1-203ENST00000473334 ANP32EQ9BTT0 268 aa22.66■■□□□ 1.22
PTP4A1-203ENST00000473334 DUSP23Q9BVJ7 150 aa22.66■■□□□ 1.22
PTP4A1-203ENST00000473334 CSNK1G3Q9Y6M4 447 aa22.66■■□□□ 1.22
PTP4A1-203ENST00000473334 LRRD1A4D1F6 860 aa22.65■■□□□ 1.22
PTP4A1-203ENST00000473334 ZNF487B1APH4 448 aa22.65■■□□□ 1.22
PTP4A1-203ENST00000473334 MATN3O15232 486 aa22.65■■□□□ 1.22
PTP4A1-203ENST00000473334 CCNCP24863 283 aa22.65■■□□□ 1.22
PTP4A1-203ENST00000473334 PEX5P50542 639 aa22.65■■□□□ 1.22
PTP4A1-203ENST00000473334 DAB2P98082 770 aa22.65■■□□□ 1.22
PTP4A1-203ENST00000473334 TRAF2Q12933 501 aa22.65■■□□□ 1.22
PTP4A1-203ENST00000473334 TMPRSS12Q86WS5 348 aa22.65■■□□□ 1.22
PTP4A1-203ENST00000473334 VSIG1Q86XK7 387 aa22.65■■□□□ 1.22
PTP4A1-203ENST00000473334 ZCCHC14Q8WYQ9 949 aaKnown RBP22.65■■□□□ 1.22
PTP4A1-203ENST00000473334 TSGA13Q96PP4 275 aa22.65■■□□□ 1.22
PTP4A1-203ENST00000473334 RNF157Q96PX1 679 aa22.65■■□□□ 1.22
PTP4A1-203ENST00000473334 POLR1EQ9GZS1 481 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms