RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 GAREM2Q75VX8 874 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 TMPRSS7Q7RTY8 843 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 TRIM74Q86UV6 250 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 TRIM73Q86UV7 250 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 AMIGO3Q86WK7 504 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 FAM90A1Q86YD7 464 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 FSTL5Q8N475 847 aaPredicted RBP6.09□□□□□ -1.43
RTF1-203ENST00000473214 FAM133AQ8N9E0 248 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 NHLRC2Q8NBF2 726 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 XXYLT1Q8NBI6 393 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 CAMKVQ8NCB2 501 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 SHCBP1Q8NEM2 672 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 SMARCC2Q8TAQ2 1214 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 CACTINQ8WUQ7 758 aaKnown RBP6.09□□□□□ -1.43
RTF1-203ENST00000473214 WDR60Q8WVS4 1066 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 HMGB4Q8WW32 186 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 SYN2Q92777 582 aaPredicted RBP6.09□□□□□ -1.43
RTF1-203ENST00000473214 SMARCE1Q969G3 411 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 SPSB4Q96A44 273 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 GRAMD1AQ96CP6 724 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 MRPL38Q96DV4 380 aaKnown RBP6.09□□□□□ -1.43
RTF1-203ENST00000473214 ERO1AQ96HE7 468 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 KIRREL1Q96J84 757 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 SAMD8Q96LT4 415 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 SPATA13Q96N96 652 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 WDFY2Q96P53 400 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 GAD1Q99259 594 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 PLIN2Q99541 437 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 HNRNPABQ99729 332 aaKnown RBP6.09□□□□□ -1.43
RTF1-203ENST00000473214 UQCC2Q9BRT2 126 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 MRPL1Q9BYD6 325 aaKnown RBP6.09□□□□□ -1.43
RTF1-203ENST00000473214 TRPV6Q9H1D0 765 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 NRDE2Q9H7Z3 1164 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 LRRC40Q9H9A6 602 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 SPATS2LQ9NUQ6 558 aaKnown RBP6.09□□□□□ -1.43
RTF1-203ENST00000473214 RIC8BQ9NVN3 520 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.09□□□□□ -1.43
RTF1-203ENST00000473214 RAB20Q9NX57 234 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 SPATA7Q9P0W8 599 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 PADI1Q9ULC6 663 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 NENFQ9UMX5 172 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 STX8Q9UNK0 236 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 SNX14Q9Y5W7 946 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 PAPPAQ13219 1627 aa6.09□□□□□ -1.43
RTF1-203ENST00000473214 PARP4Q9UKK3 1724 aaKnown RBP6.08□□□□□ -1.44
RTF1-203ENST00000473214 LMO7Q8WWI1 1683 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 SERTM2A0A1B0GWG4 89 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 PMS2P1A4D2B8 440 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 OR2A25A4D2G3 310 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 J3KTA2 159 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 NDUFS8O00217 210 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 SEPT4O43236 478 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 CIDEAO60543 219 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 SLCO2B1O94956 709 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 KRT14P02533 472 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 GSTM1P09488 218 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 ZFXP17010 805 aaPredicted RBP6.08□□□□□ -1.44
RTF1-203ENST00000473214 EPORP19235 508 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 TRIM21P19474 475 aaKnown RBP6.08□□□□□ -1.44
RTF1-203ENST00000473214 AGAP20933 346 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 PTBP1P26599 531 aaKnown RBP eCLIP6.08□□□□□ -1.44
RTF1-203ENST00000473214 CTNNB1P35222 781 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 BMI1P35226 326 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 NF2P35240 595 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 NUP62P37198 522 aaPredicted RBP6.08□□□□□ -1.44
RTF1-203ENST00000473214 WNT5AP41221 380 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 HK2P52789 917 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 NPEPPSP55786 919 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 OLR1P78380 273 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 SLC6A3Q01959 620 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 OVGP1Q12889 678 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 TSTA3Q13630 321 aaPredicted RBP6.08□□□□□ -1.44
RTF1-203ENST00000473214 LAMB3Q13751 1172 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 HNRNPDQ14103 355 aaKnown RBP6.08□□□□□ -1.44
RTF1-203ENST00000473214 DHX34Q14147 1143 aaKnown RBP6.08□□□□□ -1.44
RTF1-203ENST00000473214 VEPH1Q14D04 833 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 RRS1Q15050 365 aaKnown RBP6.08□□□□□ -1.44
RTF1-203ENST00000473214 TAZQ16635 292 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 ERCC6LQ2NKX8 1250 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 XKR3Q5GH77 459 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 MDH1BQ5I0G3 518 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 CBWD5Q5RIA9 395 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 ADGRF1Q5T601 910 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 KANK2Q63ZY3 851 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 SLFN12LQ6IEE8 588 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 CAPRIN2Q6IMN6 1127 aaKnown RBP6.08□□□□□ -1.44
RTF1-203ENST00000473214 LETMD1Q6P1Q0 360 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 NOTUMQ6P988 496 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 AAGABQ6PD74 315 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 MPZL3Q6UWV2 235 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 TADA2BQ86TJ2 420 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 VASH2Q86V25 355 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 SGMS1Q86VZ5 419 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 ZNF679Q8IYX0 411 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 TTC5Q8N0Z6 440 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 DNAJC5GQ8N7S2 189 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 ZNF366Q8N895 744 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 FSIP1Q8NA03 581 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 TMEM116Q8NCL8 245 aa6.08□□□□□ -1.44
RTF1-203ENST00000473214 ARHGAP45Q92619 1136 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms