RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 DSC2Q02487 901 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 AP1B1Q10567 949 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 WASHC5Q12768 1159 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 KLF1Q13351 362 aaPredicted RBP13.23□□□□□ -0.29
TPM3-216ENST00000473036 ZNF235Q14590 738 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 TRIM61Q5EBN2 209 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 WDR45BQ5MNZ6 344 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 MEI1Q5TIA1 1274 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 KDM7AQ6ZMT4 941 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 RABEPKQ7Z6M1 372 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 TRIM69Q86WT6 500 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.23□□□□□ -0.29
TPM3-216ENST00000473036 CCNYQ8ND76 341 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 OR2I1PQ8NGU4 316 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 ZCCHC14Q8WYQ9 949 aaKnown RBP13.23□□□□□ -0.29
TPM3-216ENST00000473036 SNX19Q92543 992 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 NUSAP1Q9BXS6 441 aaKnown RBP13.23□□□□□ -0.29
TPM3-216ENST00000473036 MIR1-1HGQ9H1L0 117 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 KDM4CQ9H3R0 1056 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 PREBQ9HCU5 417 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 TM9SF3Q9HD45 589 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 RALYQ9UKM9 306 aaKnown RBP13.23□□□□□ -0.29
TPM3-216ENST00000473036 PYCARDQ9ULZ3 195 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.23□□□□□ -0.29
TPM3-216ENST00000473036 FREM2Q5SZK8 3169 aa13.23□□□□□ -0.29
TPM3-216ENST00000473036 A0A1W2PR77 199 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 USP27XA6NNY8 438 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 RAD51BO15315 384 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 PDHA1P08559 390 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 PRLRP16471 622 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 GM2AP17900 193 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 CD68P34810 354 aaPredicted RBP13.22□□□□□ -0.29
TPM3-216ENST00000473036 NR2C2P49116 596 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 CSNK1EP49674 416 aaKnown RBP13.22□□□□□ -0.29
TPM3-216ENST00000473036 COPS2P61201 443 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 AP1S1P61966 158 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 SFSWAPQ12872 951 aaKnown RBP13.22□□□□□ -0.29
TPM3-216ENST00000473036 TFDP2Q14188 446 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 PDK1Q15118 436 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 UGP2Q16851 508 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 ODF2Q5BJF6 829 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 SYCP2LQ5T4T6 812 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 TIGD7Q6NT04 549 aaPredicted RBP13.22□□□□□ -0.29
TPM3-216ENST00000473036 FBXL19Q6PCT2 694 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 TTC7BQ86TV6 843 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 ZC3H18Q86VM9 953 aaKnown RBP13.22□□□□□ -0.29
TPM3-216ENST00000473036 HORMAD1Q86X24 394 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 PPP1R16AQ96I34 528 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 ZNF641Q96N77 438 aaPredicted RBP13.22□□□□□ -0.29
TPM3-216ENST00000473036 TUBGCP5Q96RT8 1024 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 SEMA3CQ99985 751 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 FZD3Q9NPG1 666 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 PCDH12Q9NPG4 1184 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 SCUBE2Q9NQ36 999 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 DYRK4Q9NR20 520 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 EFR3BQ9Y2G0 817 aa13.22□□□□□ -0.29
TPM3-216ENST00000473036 R3HDM2Q9Y2K5 976 aaKnown RBP13.22□□□□□ -0.29
TPM3-216ENST00000473036 A0A0U1RQS6 177 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 IGLON5A6NGN9 336 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 MIF4GDA9UHW6 222 aaKnown RBP13.21□□□□□ -0.29
TPM3-216ENST00000473036 APOC4-APOC2K7ER74 178 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 RIOK3O14730 519 aaKnown RBP13.21□□□□□ -0.29
TPM3-216ENST00000473036 BCAT2O15382 392 aaPredicted RBP13.21□□□□□ -0.29
TPM3-216ENST00000473036 FZD6O60353 706 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 PRLP01236 227 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 APOC2P02655 101 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 SERPINF2P08697 491 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 PTPN3P26045 913 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 HSPA9P38646 679 aaKnown RBP13.21□□□□□ -0.29
TPM3-216ENST00000473036 RENBPP51606 427 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 OTUD4Q01804 1114 aaKnown RBP13.21□□□□□ -0.29
TPM3-216ENST00000473036 RAD51Q06609 339 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 BCL2L1Q07817 233 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 RALGDSQ12967 914 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 NOMO1Q15155 1222 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 DUOXA1Q1HG43 343 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 PRPF39Q86UA1 669 aaKnown RBP13.21□□□□□ -0.29
TPM3-216ENST00000473036 CEP76Q8TAP6 659 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 ACTL9Q8TC94 416 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 HCAR2Q8TDS4 363 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 SPOCK2Q92563 424 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 TADA1Q96BN2 335 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 QKIQ96PU8 341 aaKnown RBP eCLIP13.21□□□□□ -0.29
TPM3-216ENST00000473036 KLF6Q99612 283 aaPredicted RBP13.21□□□□□ -0.29
TPM3-216ENST00000473036 TLR10Q9BXR5 811 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 ATP13A3Q9H7F0 1226 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 TRMT1Q9NXH9 659 aaKnown RBP13.21□□□□□ -0.29
TPM3-216ENST00000473036 SLC6A14Q9UN76 642 aa13.21□□□□□ -0.29
TPM3-216ENST00000473036 A0A1B0GTW7 788 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 A0A1B0GVT2 93 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 H0Y8X5 98 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 KCNK3O14649 394 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 SLC31A1O15431 190 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 MMP20O60882 483 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 PCDH8O95206 1070 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 PAK4O96013 591 aaPredicted RBP13.2□□□□□ -0.3
TPM3-216ENST00000473036 CFIP05156 583 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 ENGP17813 658 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 SERPINA4P29622 427 aa13.2□□□□□ -0.3
TPM3-216ENST00000473036 MMP12P39900 470 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms