RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 PIGMQ9H3S5 423 aa2.75□□□□□ -1.97
XRN1-210ENST00000472697 DNAJC18Q9H819 358 aa2.75□□□□□ -1.97
XRN1-210ENST00000472697 ZNF304Q9HCX3 659 aa2.75□□□□□ -1.97
XRN1-210ENST00000472697 Q9N2J8 555 aa2.75□□□□□ -1.97
XRN1-210ENST00000472697 DDX4Q9NQI0 724 aaKnown RBP2.75□□□□□ -1.97
XRN1-210ENST00000472697 ABHD10Q9NUJ1 306 aa2.75□□□□□ -1.97
XRN1-210ENST00000472697 OGFRQ9NZT2 677 aa2.75□□□□□ -1.97
XRN1-210ENST00000472697 ADAM29Q9UKF5 820 aa2.75□□□□□ -1.97
XRN1-210ENST00000472697 PMF1-BGLAPU3KQ54 211 aa2.75□□□□□ -1.97
XRN1-210ENST00000472697 FYCO1Q9BQS8 1478 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 ARHGAP35Q9NRY4 1499 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 CXorf65A6NEN9 183 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 CBY3A6NI87 242 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 PLPP2O43688 288 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 LPXNO60711 386 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 PMPCBO75439 489 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 CCNDBP1O95273 360 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 CFIP05156 583 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 ABCB1P08183 1280 aaPredicted RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 TMIGD3P0DMS9 266 aaPredicted RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 GHRP10912 638 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 ZFXP17010 805 aaPredicted RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 POU1F1P28069 291 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 LRPAP1P30533 357 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 RGS19P49795 217 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 MTHFSP49914 203 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 PRELPP51888 382 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 RABGGTBP53611 331 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 EIF3BP55884 814 aaKnown RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 CBX3Q13185 183 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 ITGA7Q13683 1181 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 ALKBH1Q13686 389 aaKnown RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 ALCAMQ13740 583 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 BMPR2Q13873 1038 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 TUBB2AQ13885 445 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 ZNF273Q14593 569 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 USP10Q14694 798 aaKnown RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 RNPS1Q15287 305 aaKnown RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 MEP1BQ16820 701 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 KLHL26Q53HC5 615 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 CCDC158Q5M9N0 1113 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 PMS2CLQ68D20 193 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 JADE1Q6IE81 842 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 LCTLQ6UWM7 567 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 ZER1Q7Z7L7 766 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 LILRA2Q8N149 483 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 AOPEPQ8N6M6 819 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 TC2NQ8N9U0 490 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 HSPH1Q92598 858 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 ATOH1Q92858 354 aaPredicted RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 AJUBAQ96IF1 538 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 ADAD1Q96M93 576 aaKnown RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 SMC6Q96SB8 1091 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 TUBB2BQ9BVA1 445 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 P2RY12Q9H244 342 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 PCDH18Q9HCL0 1135 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 WDR6Q9NNW5 1121 aaKnown RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 GIMAP4Q9NUV9 329 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 ADPRHL2Q9NX46 363 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 ARMCX3Q9UH62 379 aaPredicted RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 SH3BGRL2Q9UJC5 107 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 SLC25A13Q9UJS0 675 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 ATP6V0A2Q9Y487 856 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 PIK3R4Q99570 1358 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 ERVK-7P63135 1459 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 AFF2P51816 1311 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 PASKQ96RG2 1323 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 ARHGAP31Q2M1Z3 1444 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 HSPB2A8KAH6 182 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 GRXCR1A8MXD5 290 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 CSPG5O95196 566 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 RFPL3SP0C7P2 107 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 CREB1P16220 341 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 RPL13P26373 211 aaKnown RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 SERPINB6P35237 376 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 EIF2S3P41091 472 aaKnown RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 CLK3P49761 638 aaKnown RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 METAP2P50579 478 aaKnown RBP eCLIP2.74□□□□□ -1.97
XRN1-210ENST00000472697 CLCN5P51795 746 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 TRA2AQ13595 282 aaKnown RBP eCLIP2.74□□□□□ -1.97
XRN1-210ENST00000472697 DNASE1L3Q13609 305 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 PDK1Q15118 436 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 HSPB2Q16082 182 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 CYP2A13Q16696 494 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 C2orf68Q2NKX9 166 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 ATP13A5Q4VNC0 1218 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 MOXD1Q6UVY6 613 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 GLDNQ6ZMI3 551 aaPredicted RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 RBPMS2Q6ZRY4 209 aaKnown RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 ADIPOR2Q86V24 386 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 TBC1D21Q8IYX1 336 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 GHDCQ8N2G8 530 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 C8orf58Q8NAV2 365 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 ZFP28Q8NHY6 868 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 CHURC1Q8WUH1 139 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 FAM136AQ96C01 138 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 SAAL1Q96ER3 474 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 CD180Q99467 661 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 EDEM2Q9BV94 578 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms