RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 SPARCL1Q14515 664 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 SLC1A5Q15758 541 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 USP39Q53GS9 565 aaKnown RBP16.96■□□□□ 0.31
CCM2-205ENST00000472223 KCTD11Q693B1 232 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 TMEM105Q8N8V8 129 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 MDGA1Q8NFP4 955 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 CPT1BQ92523 772 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 ARRDC3Q96B67 414 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 SPACA7Q96KW9 195 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 SLC6A17Q9H1V8 727 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 EPB41L5Q9HCM4 733 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 XAB2Q9HCS7 855 aaKnown RBP16.96■□□□□ 0.31
CCM2-205ENST00000472223 ITM2CQ9NQX7 267 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 HACD3Q9P035 362 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 TSPAN11A1L157 253 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 PRR33A8MZF0 331 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 RIOK3O14730 519 aaKnown RBP16.95■□□□□ 0.3
CCM2-205ENST00000472223 AXIN1O15169 862 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 FZD6O60353 706 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 SEC31AO94979 1220 aaKnown RBP16.95■□□□□ 0.3
CCM2-205ENST00000472223 PDHA1P08559 390 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 TIMP2P16035 220 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 P2RY2P41231 377 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 RPL21P46778 160 aaKnown RBP16.95■□□□□ 0.3
CCM2-205ENST00000472223 ITGA8P53708 1063 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 CSTF1Q05048 431 aaKnown RBP16.95■□□□□ 0.3
CCM2-205ENST00000472223 CNTN1Q12860 1018 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 KCNJ11Q14654 390 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 SIRPB2Q5JXA9 342 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 TMEM31Q5JXX7 168 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 RNASEH2BQ5TBB1 312 aaKnown RBP16.95■□□□□ 0.3
CCM2-205ENST00000472223 DUPD1Q68J44 220 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 RANBP10Q6VN20 620 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 CEP128Q6ZU80 1094 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 PARS2Q7L3T8 475 aaKnown RBP16.95■□□□□ 0.3
CCM2-205ENST00000472223 RASSF3Q86WH2 238 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 KLHDC8BQ8IXV7 354 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 MCUQ8NE86 351 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 OR14C36Q8NHC7 312 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 PIH1D2Q8WWB5 315 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 IFT81Q8WYA0 676 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 SPOCK2Q92563 424 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 SCRN2Q96FV2 425 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 APOL2Q9BQE5 337 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 FAM129AQ9BZQ8 928 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 BTBD1Q9H0C5 482 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 KDM4CQ9H3R0 1056 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 TRABDQ9H4I3 376 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 SGK2Q9HBY8 427 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 CD248Q9HCU0 757 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 RRAGDQ9NQL2 400 aaPredicted RBP16.95■□□□□ 0.3
CCM2-205ENST00000472223 BFARQ9NZS9 450 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 FBXO4Q9UKT5 387 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 SHOC2Q9UQ13 582 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 TTC28Q96AY4 2481 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 VCANP13611 3396 aa16.95■□□□□ 0.3
CCM2-205ENST00000472223 CCDC163A0A0D9SF12 145 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 A0A0J9YYE9 177 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 LRRC72A6NJI9 287 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 TSPAN6O43657 245 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 GPR37L1O60883 481 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 NDUFS2O75306 463 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 USP12O75317 370 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 TRBC1P01850 177 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 MLNP12872 115 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 CTPS1P17812 591 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 HOXA6P31267 233 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 ADRA1AP35348 466 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 MAGEA6P43360 314 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 NPY2RP49146 381 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 TPMTP51580 245 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 NUBP1P53384 320 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 PDE1BQ01064 536 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 HLTFQ14527 1009 aaKnown RBP eCLIP16.94■□□□□ 0.3
CCM2-205ENST00000472223 QPCTQ16769 361 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 LRRC8BQ6P9F7 803 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 FAM124AQ86V42 546 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 PDIK1LQ8N165 341 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 AADATQ8N5Z0 425 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 NAT8LQ8N9F0 302 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 OR52K1Q8NGK4 314 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 CXorf40AQ8TE69 158 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 GORASP1Q9BQQ3 440 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 FAM126AQ9BYI3 521 aaPredicted RBP16.94■□□□□ 0.3
CCM2-205ENST00000472223 TPSD1Q9BZJ3 242 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 TSPYL1Q9H0U9 437 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 NEUROG2Q9H2A3 272 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 ARNT2Q9HBZ2 717 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 MAGEE1Q9HCI5 957 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 C2orf42Q9NWW7 574 aa16.94■□□□□ 0.3
CCM2-205ENST00000472223 MTRF1LQ9UGC7 380 aaKnown RBP16.94■□□□□ 0.3
CCM2-205ENST00000472223 A0A0C4DFX4 3053 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 TBC1D3DA0A087WVF3 549 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 TBC1D3IA0A087WXS9 549 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 TBC1D3EA0A087X179 549 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 TBC1D3KA0A087X1G2 549 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 FAM86C2PA6NEL3 165 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 TBC1D3FA6NER0 549 aaPredicted RBP16.93■□□□□ 0.3
CCM2-205ENST00000472223 C2orf81A6NN90 581 aa16.93■□□□□ 0.3
CCM2-205ENST00000472223 TBC1D3LB9A6J9 549 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms