RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 MPP4Q96JB8 637 aa4.01□□□□□ -1.77
MDM2-216ENST00000471946 ZNF570Q96NI8 536 aa4.01□□□□□ -1.77
MDM2-216ENST00000471946 NR1H4Q96RI1 486 aaPredicted RBP4.01□□□□□ -1.77
MDM2-216ENST00000471946 SLC25A33Q9BSK2 321 aa4.01□□□□□ -1.77
MDM2-216ENST00000471946 H2AFJQ9BTM1 129 aa4.01□□□□□ -1.77
MDM2-216ENST00000471946 PDCL3Q9H2J4 239 aa4.01□□□□□ -1.77
MDM2-216ENST00000471946 MAGEE1Q9HCI5 957 aa4.01□□□□□ -1.77
MDM2-216ENST00000471946 IRAK4Q9NWZ3 460 aa4.01□□□□□ -1.77
MDM2-216ENST00000471946 DYTNA2CJ06 578 aa4□□□□□ -1.77
MDM2-216ENST00000471946 FAM90A8PA6NJQ4 464 aa4□□□□□ -1.77
MDM2-216ENST00000471946 EPB41L2O43491 1005 aaKnown RBP4□□□□□ -1.77
MDM2-216ENST00000471946 CD4P01730 458 aa4□□□□□ -1.77
MDM2-216ENST00000471946 PRSS2P07478 247 aa4□□□□□ -1.77
MDM2-216ENST00000471946 FAM90A13PP0C7W8 464 aa4□□□□□ -1.77
MDM2-216ENST00000471946 FAM90A24PP0C7X0 464 aa4□□□□□ -1.77
MDM2-216ENST00000471946 IRF1P10914 325 aa4□□□□□ -1.77
MDM2-216ENST00000471946 AGAP20933 346 aa4□□□□□ -1.77
MDM2-216ENST00000471946 ITGB8P26012 769 aa4□□□□□ -1.77
MDM2-216ENST00000471946 KRT9P35527 623 aa4□□□□□ -1.77
MDM2-216ENST00000471946 CTCFP49711 727 aaPredicted RBP4□□□□□ -1.77
MDM2-216ENST00000471946 COMPP49747 757 aaPredicted RBP4□□□□□ -1.77
MDM2-216ENST00000471946 POU5F1BQ06416 359 aa4□□□□□ -1.77
MDM2-216ENST00000471946 C2orf68Q2NKX9 166 aa4□□□□□ -1.77
MDM2-216ENST00000471946 ATF7IPQ6VMQ6 1270 aa4□□□□□ -1.77
MDM2-216ENST00000471946 HAPLN4Q86UW8 402 aa4□□□□□ -1.77
MDM2-216ENST00000471946 FJX1Q86VR8 437 aa4□□□□□ -1.77
MDM2-216ENST00000471946 CCDC105Q8IYK2 499 aa4□□□□□ -1.77
MDM2-216ENST00000471946 AADATQ8N5Z0 425 aa4□□□□□ -1.77
MDM2-216ENST00000471946 CADM4Q8NFZ8 388 aa4□□□□□ -1.77
MDM2-216ENST00000471946 ERGIC1Q969X5 290 aa4□□□□□ -1.77
MDM2-216ENST00000471946 NAF1Q96HR8 494 aaKnown RBP4□□□□□ -1.77
MDM2-216ENST00000471946 TMEM204Q9BSN7 226 aa4□□□□□ -1.77
MDM2-216ENST00000471946 TKTL2Q9H0I9 626 aa4□□□□□ -1.77
MDM2-216ENST00000471946 DDX4Q9NQI0 724 aaKnown RBP4□□□□□ -1.77
MDM2-216ENST00000471946 TAS2R10Q9NYW0 307 aa4□□□□□ -1.77
MDM2-216ENST00000471946 CISD1Q9NZ45 108 aaKnown RBP4□□□□□ -1.77
MDM2-216ENST00000471946 SLC45A1Q9Y2W3 748 aa4□□□□□ -1.77
MDM2-216ENST00000471946 SCINQ9Y6U3 715 aa4□□□□□ -1.77
MDM2-216ENST00000471946 IGLV5-52A0A0A0MRZ9 124 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 LRRC53A6NM62 1247 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 TAF4O00268 1085 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 BCAT2O15382 392 aaPredicted RBP3.99□□□□□ -1.77
MDM2-216ENST00000471946 HSPA12AO43301 675 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 KCNAB3O43448 404 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 SERPINI2O75830 405 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 RTN3O95197 1032 aaPredicted RBP3.99□□□□□ -1.77
MDM2-216ENST00000471946 ZNF12P17014 697 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 TNFAIP3P21580 790 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 TNFRSF8P28908 595 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 CCKARP32238 428 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 ICAM3P32942 547 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 RPL3P39023 403 aaKnown RBP3.99□□□□□ -1.77
MDM2-216ENST00000471946 RGS2P41220 211 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 PDLIM4P50479 330 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 BNC1Q01954 994 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 DCTN2Q13561 401 aaKnown RBP3.99□□□□□ -1.77
MDM2-216ENST00000471946 NEDD9Q14511 834 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 PLCB4Q15147 1175 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 TSTQ16762 297 aaKnown RBP3.99□□□□□ -1.77
MDM2-216ENST00000471946 HIST2H2BCQ6DN03 193 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 HIST2H2BDQ6DRA6 164 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 B3GNT6Q6ZMB0 384 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 CCDC129Q6ZRS4 1044 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 SHFQ7M4L6 423 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 DIS3L2Q8IYB7 885 aaKnown RBP3.99□□□□□ -1.77
MDM2-216ENST00000471946 METTL6Q8TCB7 284 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 ELP5Q8TE02 316 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 OTULINQ96BN8 352 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 FBXL8Q96CD0 374 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 THOC3Q96J01 351 aaKnown RBP3.99□□□□□ -1.77
MDM2-216ENST00000471946 TXNDC15Q96J42 360 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 MARK4Q96L34 752 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 LRFN5Q96NI6 719 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 SEZ6LQ9BYH1 1024 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 BRF2Q9HAW0 419 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 BPIFA1Q9NP55 256 aa3.99□□□□□ -1.77
MDM2-216ENST00000471946 INTS6Q9UL03 887 aaKnown RBP3.99□□□□□ -1.77
MDM2-216ENST00000471946 AGO1Q9UL18 857 aaKnown RBP3.99□□□□□ -1.77
MDM2-216ENST00000471946 IGKV2D-30A0A075B6S6 120 aa3.98□□□□□ -1.77
MDM2-216ENST00000471946 B4E171 279 aa3.98□□□□□ -1.77
MDM2-216ENST00000471946 SLC28A2O43868 658 aa3.98□□□□□ -1.77
MDM2-216ENST00000471946 NDUFB4O95168 129 aa3.98□□□□□ -1.77
MDM2-216ENST00000471946 MMP2P08253 660 aa3.98□□□□□ -1.77
MDM2-216ENST00000471946 PLA2G2AP14555 144 aa3.98□□□□□ -1.77
MDM2-216ENST00000471946 TSPAN7P41732 249 aa3.98□□□□□ -1.77
MDM2-216ENST00000471946 CCR9P51686 369 aa3.98□□□□□ -1.77
MDM2-216ENST00000471946 EIF3BP55884 814 aaKnown RBP3.98□□□□□ -1.77
MDM2-216ENST00000471946 TMEM115Q12893 351 aaPredicted RBP3.98□□□□□ -1.77
MDM2-216ENST00000471946 TRAF2Q12933 501 aa3.98□□□□□ -1.77
MDM2-216ENST00000471946 DDX10Q13206 875 aaKnown RBP3.98□□□□□ -1.77
MDM2-216ENST00000471946 ERV3-1Q14264 604 aa3.98□□□□□ -1.77
MDM2-216ENST00000471946 TCTN1Q2MV58 587 aa3.98□□□□□ -1.77
MDM2-216ENST00000471946 COL28A1Q2UY09 1125 aa3.98□□□□□ -1.77
MDM2-216ENST00000471946 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
MDM2-216ENST00000471946 ANKRD54Q6NXT1 300 aa3.98□□□□□ -1.77
MDM2-216ENST00000471946 PDXDC1Q6P996 788 aa3.98□□□□□ -1.77
MDM2-216ENST00000471946 ZC3HC1Q86WB0 502 aaKnown RBP3.98□□□□□ -1.77
MDM2-216ENST00000471946 SLC35F3Q8IY50 421 aa3.98□□□□□ -1.77
MDM2-216ENST00000471946 NUDCD2Q8WVJ2 157 aa3.98□□□□□ -1.77
MDM2-216ENST00000471946 PHF21BQ96EK2 531 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms