RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 SNX32Q86XE0 403 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 OR14C36Q8NHC7 312 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PYDC1Q8WXC3 89 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CLN6Q9NWW5 311 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PCDHB11Q9Y5F2 797 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PCDHA3Q9Y5H8 950 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MYH15Q9Y2K3 1946 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 NFASCO94856 1347 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CPSF4LA6NMK7 179 aaKnown RBP13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 GDI2P50395 445 aaKnown RBP13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ATCAYQ86WG3 371 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 GDPD5Q8WTR4 605 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MCMBPQ9BTE3 642 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 STARD13Q9Y3M8 1113 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 AQP1P29972 269 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PSMD7P51665 324 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SWI5Q1ZZU3 235 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 OR52K2Q8NGK3 314 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 TMPRSS4Q9NRS4 437 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ENOPH1Q9UHY7 261 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 IKZF3Q9UKT9 509 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DNPEPQ9ULA0 475 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SCTRP47872 440 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CCZ1BP86790 482 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CCZ1P86791 482 aaPredicted RBP13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 RIN1Q13671 783 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DNERQ8NFT8 737 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 OR10H5Q8NGA6 315 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PNPT1Q8TCS8 783 aaKnown RBP13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 METTL21AQ8WXB1 218 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 LRRC46Q96FV0 321 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ZNF518BQ9C0D4 1074 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 APC2O95996 2303 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 TPP1O14773 563 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 GNRH1P01148 92 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 FAM58BPP0C7Q3 252 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SAGP10523 405 aaPredicted RBP13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 GRIA3P42263 894 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SP3Q02447 781 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MAPKAPK3Q16644 382 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 INO80DQ53TQ3 878 aaPredicted RBP13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 GALNT7Q86SF2 657 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CKAP2Q8WWK9 683 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 FRMD8P1Q9BZ68 369 aaPredicted RBP13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 POPDC2Q9HBU9 364 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DMTF1Q9Y222 760 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 RWDD3Q9Y3V2 267 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ARHGAP31Q2M1Z3 1444 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 GCATO75600 419 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 RPLP2P05387 115 aaKnown RBP13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ABATP80404 500 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DCLRE1BQ9H816 532 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ABI3Q9P2A4 366 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 BTN3A3O00478 584 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 RBL1P28749 1068 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MIPP30301 263 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ERVK-7P63135 1459 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SEMA5AQ13591 1074 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 FRG1Q14331 258 aaKnown RBP13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 COPS5Q92905 334 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 TOP1MTQ969P6 601 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 WRAP53Q9BUR4 548 aaKnown RBP13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 IKZF2Q9UKS7 526 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SPATA31A1Q5TZJ5 1347 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 RLN1P04808 185 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 GABRR2P28476 465 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MAT2AP31153 395 aaKnown RBP13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DEFB115Q30KQ5 88 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PTPN20Q4JDL3 420 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ZNF571Q7Z3V5 609 aaPredicted RBP13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ING5Q8WYH8 240 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PPP1R14DQ9NXH3 145 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DKK3Q9UBP4 350 aa13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ZNF214Q9UL59 606 aaPredicted RBP13.3□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 USP42Q9H9J4 1324 aaKnown RBP13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ADH1AP07327 375 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 TGFB3P10600 412 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PPP1R15BQ5SWA1 713 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 TSHZ1Q6ZSZ6 1077 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ADHFE1Q8IWW8 467 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 KIAA0319LQ8IZA0 1049 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 BHLHE22Q8NFJ8 381 aaPredicted RBP13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 HTATIP2Q9BUP3 242 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CHID1Q9BWS9 393 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SEMA4AQ9H3S1 761 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PROSCO94903 275 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CYP1A1P04798 512 aaPredicted RBP13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 RPL38P63173 70 aaKnown RBP13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PSMD5Q16401 504 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 STK40Q8N2I9 435 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ZNF433Q8N7K0 673 aaPredicted RBP13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 C1orf50Q9BV19 199 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MOCS1Q9NZB8 636 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 RSL24D1Q9UHA3 163 aaKnown RBP13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SCN1AP35498 2009 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 FCHO1O14526 889 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DNASE1L1P49184 302 aa13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ATXN1P54253 815 aaKnown RBP13.29□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PHYKPLQ8IUZ5 450 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms