RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 A0A1B0GVT2 93 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 A0A1W2PR77 199 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 GOLGA6L9A6NEM1 432 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 IGLON5A6NGN9 336 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 CDX4O14627 284 aaPredicted RBP15.39■□□□□ 0.05
SDC3-203ENST00000471567 SLC31A1O15431 190 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 ZNF189O75820 626 aaPredicted RBP15.39■□□□□ 0.05
SDC3-203ENST00000471567 PGLSO95336 258 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 CPP00450 1065 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 HNRNPA2B1P22626 353 aaKnown RBP15.39■□□□□ 0.05
SDC3-203ENST00000471567 PTPN3P26045 913 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 AKT2P31751 481 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 MMP12P39900 470 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 ATXN3P54252 364 aaPredicted RBP15.39■□□□□ 0.05
SDC3-203ENST00000471567 NIPAL4Q0D2K0 466 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 GRIK2Q13002 908 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 ZNF211Q13398 564 aaPredicted RBP15.39■□□□□ 0.05
SDC3-203ENST00000471567 STAT4Q14765 748 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 SLC14A2Q15849 920 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 LRRC73Q5JTD7 316 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 ARMC12Q5T9G4 340 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 STPG1Q5TH74 334 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 AADACL2Q6P093 401 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 ADAT2Q7Z6V5 191 aaKnown RBP15.39■□□□□ 0.05
SDC3-203ENST00000471567 TMEM145Q8NBT3 493 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 ACTL9Q8TC94 416 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 TEKT5Q96M29 485 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 FERMT1Q9BQL6 677 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 SEPT10Q9P0V9 454 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 GGT7Q9UJ14 662 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 ANKRD6Q9Y2G4 727 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 PCDHB9Q9Y5E1 797 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 HS3ST3A1Q9Y663 406 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 TRPM6Q9BX84 2022 aa15.39■□□□□ 0.05
SDC3-203ENST00000471567 PCDH15Q96QU1 1955 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 H7C0C1 242 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 WNT9AO14904 365 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 FZD6O60353 706 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 MAGEC1O60732 1142 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 MMP20O60882 483 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 TM7SF2O76062 418 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 PAK4O96013 591 aaPredicted RBP15.38■□□□□ 0.05
SDC3-203ENST00000471567 PRLRP16471 622 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 ITIH2P19823 946 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 ATP5OP48047 213 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 C21orf59P57076 290 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 RPL26P61254 145 aaKnown RBP15.38■□□□□ 0.05
SDC3-203ENST00000471567 FAM193AP78312 1265 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 OTUD4Q01804 1114 aaKnown RBP15.38■□□□□ 0.05
SDC3-203ENST00000471567 BNC1Q01954 994 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 WASHC5Q12768 1159 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 KLF1Q13351 362 aaPredicted RBP15.38■□□□□ 0.05
SDC3-203ENST00000471567 FGL2Q14314 439 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 SEL1L2Q5TEA6 688 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 B4GALNT4Q76KP1 1039 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 DPPA4Q7L190 304 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 CDKL3Q8IVW4 592 aaPredicted RBP15.38■□□□□ 0.05
SDC3-203ENST00000471567 REXO1L1PQ8IX06 675 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 NDUFAF2Q8N183 169 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 DENND6BQ8NEG7 585 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 PDCD6IPQ8WUM4 868 aaKnown RBP15.38■□□□□ 0.05
SDC3-203ENST00000471567 PIH1D2Q8WWB5 315 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 HTR3CQ8WXA8 447 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 KLK6Q92876 244 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 IMP4Q96G21 291 aaKnown RBP15.38■□□□□ 0.05
SDC3-203ENST00000471567 AGAP3Q96P47 875 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 GTPBP2Q9BX10 602 aaKnown RBP15.38■□□□□ 0.05
SDC3-203ENST00000471567 C1QTNF7Q9BXJ2 289 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 TDRD1Q9BXT4 1180 aaKnown RBP15.38■□□□□ 0.05
SDC3-203ENST00000471567 SLC25A51Q9H1U9 297 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 CARD9Q9H257 536 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 GLOD4Q9HC38 313 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 FSCN3Q9NQT6 498 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 CDV3Q9UKY7 258 aaKnown RBP15.38■□□□□ 0.05
SDC3-203ENST00000471567 RPL26L1Q9UNX3 145 aaKnown RBP15.38■□□□□ 0.05
SDC3-203ENST00000471567 PPIL1Q9Y3C6 166 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 ANKRD36A6QL64 1941 aa15.38■□□□□ 0.05
SDC3-203ENST00000471567 TLR4O00206 839 aa15.37■□□□□ 0.05
SDC3-203ENST00000471567 SLC30A4O14863 429 aa15.37■□□□□ 0.05
SDC3-203ENST00000471567 DFNA5O60443 496 aa15.37■□□□□ 0.05
SDC3-203ENST00000471567 CER1O95813 267 aa15.37■□□□□ 0.05
SDC3-203ENST00000471567 WNT1P04628 370 aa15.37■□□□□ 0.05
SDC3-203ENST00000471567 MMP2P08253 660 aa15.37■□□□□ 0.05
SDC3-203ENST00000471567 CYP2A6P11509 494 aaPredicted RBP15.37■□□□□ 0.05
SDC3-203ENST00000471567 CTSKP43235 329 aa15.37■□□□□ 0.05
SDC3-203ENST00000471567 EIF3EP60228 445 aaKnown RBP15.37■□□□□ 0.05
SDC3-203ENST00000471567 SKOR1P84550 965 aa15.37■□□□□ 0.05
SDC3-203ENST00000471567 IHHQ14623 411 aa15.37■□□□□ 0.05
SDC3-203ENST00000471567 AGERQ15109 404 aa15.37■□□□□ 0.05
SDC3-203ENST00000471567 RSPO4Q2I0M5 234 aaPredicted RBP15.37■□□□□ 0.05
SDC3-203ENST00000471567 KIF19Q2TAC6 998 aa15.37■□□□□ 0.05
SDC3-203ENST00000471567 MINDY1Q8N5J2 469 aa15.37■□□□□ 0.05
SDC3-203ENST00000471567 SCRN2Q96FV2 425 aa15.37■□□□□ 0.05
SDC3-203ENST00000471567 MCCC1Q96RQ3 725 aaPredicted RBP15.37■□□□□ 0.05
SDC3-203ENST00000471567 KLF6Q99612 283 aaPredicted RBP15.37■□□□□ 0.05
SDC3-203ENST00000471567 WRAP53Q9BUR4 548 aaKnown RBP15.37■□□□□ 0.05
SDC3-203ENST00000471567 CEP41Q9BYV8 373 aa15.37■□□□□ 0.05
SDC3-203ENST00000471567 DNAAF2Q9NVR5 837 aaKnown RBP15.37■□□□□ 0.05
SDC3-203ENST00000471567 TRHDEQ9UKU6 1024 aa15.37■□□□□ 0.05
SDC3-203ENST00000471567 PLXNA2O75051 1894 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms