RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 JMJD7P0C870 316 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 CTSEP14091 401 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 TSHRP16473 764 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 TFE3P19532 575 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-211ENST00000471455 SDC4P31431 198 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 IGFALSP35858 605 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 FLT3P36888 993 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 EIF4A3P38919 411 aaKnown RBP9.23□□□□□ -0.93
CPSF4-211ENST00000471455 CSRP3P50461 194 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 RAPGEF1Q13905 1077 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 MAN2A1Q16706 1144 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 MYLK3Q32MK0 819 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 PERM1Q5SV97 790 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 GDPD4Q6W3E5 623 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 RAB11FIP2Q7L804 512 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 TTC7BQ86TV6 843 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 FAM131BQ86XD5 332 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 ZNF354CQ86Y25 554 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 XYLT1Q86Y38 959 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 FAM71AQ8IYT1 594 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 OR6K2Q8NGY2 324 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 CENPTQ96BT3 561 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 TBC1D31Q96DN5 1066 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 PRR11Q96HE9 360 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-211ENST00000471455 NCAPGQ9BPX3 1015 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.23□□□□□ -0.93
CPSF4-211ENST00000471455 SEMA4CQ9C0C4 833 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 ETNK1Q9HBU6 452 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 PLCB1Q9NQ66 1216 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 AKAP7Q9P0M2 348 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-211ENST00000471455 GULP1Q9UBP9 304 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 ZNF212Q9UDV6 495 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 OR12D3Q9UGF7 316 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 KLF15Q9UIH9 416 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 ACSL6Q9UKU0 697 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 ITM2BQ9Y287 266 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 HECTD1Q9ULT8 2610 aa9.23□□□□□ -0.93
CPSF4-211ENST00000471455 TENM4Q6N022 2769 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 A0A1W2PNU3 283 aaPredicted RBP9.22□□□□□ -0.93
CPSF4-211ENST00000471455 GOLGA8SH3BPF8 625 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 I6L893 689 aaPredicted RBP9.22□□□□□ -0.93
CPSF4-211ENST00000471455 RNF103O00237 685 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 FOXN3O00409 490 aaPredicted RBP9.22□□□□□ -0.93
CPSF4-211ENST00000471455 NTN3O00634 580 aaPredicted RBP9.22□□□□□ -0.93
CPSF4-211ENST00000471455 AREL1O15033 823 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 YY2O15391 372 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 ZW10O43264 779 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 GCATO75600 419 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 RPLP0P05388 317 aaKnown RBP9.22□□□□□ -0.93
CPSF4-211ENST00000471455 LIPCP11150 499 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 CYP11B1P15538 503 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 CCKBRP32239 447 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 HK3P52790 923 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 PDX1P52945 283 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 RHOAP61586 193 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 C1orf61Q13536 156 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 GRM3Q14832 879 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 LRRC14Q15048 493 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 TPRG1LQ5T0D9 272 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 CFAP58Q5T655 872 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 ERAP2Q6P179 960 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 KYQ8NBH2 561 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 PCDH19Q8TAB3 1148 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 CCDC74AQ96AQ1 378 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 SGF29Q96ES7 293 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 CFAP57Q96MR6 1250 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 KLHL32Q96NJ5 620 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 EDEM3Q9BZQ6 932 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 TMEM248Q9NWD8 314 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 DKK3Q9UBP4 350 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 KLQ9UEF7 1012 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 GPR34Q9UPC5 381 aa9.22□□□□□ -0.93
CPSF4-211ENST00000471455 TLN1Q9Y490 2541 aaKnown RBP9.22□□□□□ -0.93
CPSF4-211ENST00000471455 PTPN13Q12923 2485 aa9.21□□□□□ -0.93
CPSF4-211ENST00000471455 NVLO15381 856 aaKnown RBP9.21□□□□□ -0.94
CPSF4-211ENST00000471455 BUB1O43683 1085 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 KDELR3O43731 214 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 MMP20O60882 483 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 DESP17661 470 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 KELP23276 732 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 CD82P27701 267 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 SLC5A2P31639 672 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 GKP32189 559 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 ADRA1BP35368 520 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 UGT1A5P35504 534 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 ACVRL1P37023 503 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 ATP11AP98196 1134 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 APBA1Q02410 837 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 NFATC3Q12968 1075 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 DRAP1Q14919 205 aaPredicted RBP9.21□□□□□ -0.94
CPSF4-211ENST00000471455 NFATC4Q14934 902 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 IRF4Q15306 451 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 KLHL40Q2TBA0 621 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 INO80DQ53TQ3 878 aaPredicted RBP9.21□□□□□ -0.94
CPSF4-211ENST00000471455 MANEAQ5SRI9 462 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 MANEALQ5VSG8 457 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 ATG14Q6ZNE5 492 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 STRADAQ7RTN6 431 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 BNIPLQ7Z465 357 aa9.21□□□□□ -0.94
CPSF4-211ENST00000471455 ZNF677Q86XU0 584 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms