RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 ASIC4Q96FT7 647 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 MYO19Q96H55 970 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 AGAP2Q99490 1192 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 APOL5Q9BWW9 433 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 TM6SF2Q9BZW4 377 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 MFSD1Q9H3U5 465 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 RHOJQ9H4E5 214 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 ZNF576Q9H609 170 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 THG1LQ9NWX6 298 aaKnown RBP9.44□□□□□ -0.9
VPS52-216ENST00000471309 CLEC1BQ9P126 229 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 CDH22Q9UJ99 828 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 SLC27A6Q9Y2P4 619 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 PCDHGC4Q9Y5F7 938 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 SPO11Q9Y5K1 396 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 ANKRD36A6QL64 1941 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 CEP290O15078 2479 aa9.44□□□□□ -0.9
VPS52-216ENST00000471309 ZNF106Q9H2Y7 1883 aaKnown RBP9.43□□□□□ -0.9
VPS52-216ENST00000471309 TMEM265A0A087WTH1 108 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 ANKRD66B4E2M5 251 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 GOLGA8RI6L899 631 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 TRAFD1O14545 582 aaPredicted RBP9.43□□□□□ -0.9
VPS52-216ENST00000471309 COPEO14579 308 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 TPP1O14773 563 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 HTRA2O43464 458 aaPredicted RBP9.43□□□□□ -0.9
VPS52-216ENST00000471309 TBX10O75333 385 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 RPP40O75818 363 aaKnown RBP9.43□□□□□ -0.9
VPS52-216ENST00000471309 PGLSO95336 258 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 ASMTLO95671 621 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 ALDOAP04075 364 aaKnown RBP9.43□□□□□ -0.9
VPS52-216ENST00000471309 ASLP04424 464 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 PDHA1P08559 390 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 CISD3P0C7P0 127 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 PYGBP11216 843 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 SERPINA4P29622 427 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 RPA3P35244 121 aaPredicted RBP9.43□□□□□ -0.9
VPS52-216ENST00000471309 HADHAP40939 763 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 SLC1A2P43004 574 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 DGKGP49619 791 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 SERPINB8P50452 374 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 ZNF140P52738 457 aaPredicted RBP9.43□□□□□ -0.9
VPS52-216ENST00000471309 PDE1BQ01064 536 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 BCL2L1Q07817 233 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 ILF2Q12905 390 aaKnown RBP9.43□□□□□ -0.9
VPS52-216ENST00000471309 GRM3Q14832 879 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 TAF1AQ15573 450 aaPredicted RBP9.43□□□□□ -0.9
VPS52-216ENST00000471309 QPCTQ16769 361 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 CTC1Q2NKJ3 1217 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 DGKKQ5KSL6 1271 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 ATAT1Q5SQI0 421 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 ARMC12Q5T9G4 340 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 MBLAC2Q68D91 279 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 TRIM68Q6AZZ1 485 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 ZNF470Q6ECI4 717 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 CES5AQ6NT32 575 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 NEPROQ6NW34 567 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 GLT6D1Q7Z4J2 308 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 ZC3HC1Q86WB0 502 aaKnown RBP9.43□□□□□ -0.9
VPS52-216ENST00000471309 PLPP6Q8IY26 295 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 C2CD4AQ8NCU7 369 aaPredicted RBP9.43□□□□□ -0.9
VPS52-216ENST00000471309 MGARPQ8TDB4 240 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 STYXQ8WUJ0 223 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 DYDC1Q8WWB3 177 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 PTPRN2Q92932 1015 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 VPS39Q96JC1 886 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 RPL10LQ96L21 214 aaKnown RBP9.43□□□□□ -0.9
VPS52-216ENST00000471309 RIPOR3Q96MK2 946 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 KLF6Q99612 283 aaPredicted RBP9.43□□□□□ -0.9
VPS52-216ENST00000471309 GPR22Q99680 433 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 C19orf43Q9BQ61 176 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 FAM83CQ9BQN1 747 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 EPN3Q9H201 632 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 S1PR5Q9H228 398 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 TNKS2Q9H2K2 1166 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 ATP13A3Q9H7F0 1226 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 ZFP14Q9HCL3 533 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 NLE1Q9NVX2 485 aaPredicted RBP9.43□□□□□ -0.9
VPS52-216ENST00000471309 EVLQ9UI08 416 aaPredicted RBP9.43□□□□□ -0.9
VPS52-216ENST00000471309 ERVW-1Q9UQF0 538 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 PCDHB9Q9Y5E1 797 aa9.43□□□□□ -0.9
VPS52-216ENST00000471309 C2orf81A6NN90 581 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 WASH3PC4AMC7 463 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 GOLGA8TH3BQL2 631 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 TULP3O75386 442 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 PRKCGP05129 697 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 SRPRAP08240 638 aaKnown RBP9.42□□□□□ -0.9
VPS52-216ENST00000471309 ARSAP15289 507 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 POLR2EP19388 210 aaKnown RBP9.42□□□□□ -0.9
VPS52-216ENST00000471309 OGNP20774 298 aaKnown RBP9.42□□□□□ -0.9
VPS52-216ENST00000471309 CRHR1P34998 444 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 MTHFRP42898 656 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 POLD2P49005 469 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 CSRP3P50461 194 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 ARSDP51689 593 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 CCNHP51946 323 aaPredicted RBP9.42□□□□□ -0.9
VPS52-216ENST00000471309 EPHB1P54762 984 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 WDR4P57081 412 aaKnown RBP9.42□□□□□ -0.9
VPS52-216ENST00000471309 PRAMEP78395 509 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 IL9RQ01113 521 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 PPARDQ03181 441 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 COL19A1Q14993 1142 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms