RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 FAM204AQ9H8W3 233 aa5.95□□□□□ -1.46
VARS-222ENST00000470953 CHST11Q9NPF2 352 aa5.95□□□□□ -1.46
VARS-222ENST00000470953 SLAMF7Q9NQ25 335 aa5.95□□□□□ -1.46
VARS-222ENST00000470953 ABCC13Q9NSE7 274 aa5.95□□□□□ -1.46
VARS-222ENST00000470953 SFMBT1Q9UHJ3 866 aa5.95□□□□□ -1.46
VARS-222ENST00000470953 STOML2Q9UJZ1 356 aa5.95□□□□□ -1.46
VARS-222ENST00000470953 USP3Q9Y6I4 520 aa5.95□□□□□ -1.46
VARS-222ENST00000470953 OAS3Q9Y6K5 1087 aaKnown RBP5.95□□□□□ -1.46
VARS-222ENST00000470953 SYNJ2BP-COX16A0A087WUM0 186 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 A0A0G2JK05 382 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 A6NNZ2 444 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 YJEFN3A6XGL0 299 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 E7ENQ6 273 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 C19orf84I3L1E1 186 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 CAPN5O15484 640 aaPredicted RBP5.94□□□□□ -1.46
VARS-222ENST00000470953 MOCS2O96007 188 aaPredicted RBP5.94□□□□□ -1.46
VARS-222ENST00000470953 PAK4O96013 591 aaPredicted RBP5.94□□□□□ -1.46
VARS-222ENST00000470953 CALCAP01258 141 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 ASLP04424 464 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 CTSLP07711 333 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 ANXA6P08133 673 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 TSHRP16473 764 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 SLC9A1P19634 815 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 F8A1P23610 371 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 PON1P27169 355 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 ADSLP30566 484 aaPredicted RBP5.94□□□□□ -1.46
VARS-222ENST00000470953 DNAJA1P31689 397 aaKnown RBP5.94□□□□□ -1.46
VARS-222ENST00000470953 SLC11A2P49281 568 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 COPB1P53618 953 aaKnown RBP5.94□□□□□ -1.46
VARS-222ENST00000470953 DAOAP59103 153 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 BPIFB4P59827 614 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 ZNF445P59923 1031 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 RPS24P62847 133 aaKnown RBP5.94□□□□□ -1.46
VARS-222ENST00000470953 TPM4P67936 248 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 ECT2LQ008S8 904 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 MYL5Q02045 173 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 PDCLQ13371 301 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 TMEM259Q4ZIN3 620 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 FAM133BQ5BKY9 247 aaKnown RBP5.94□□□□□ -1.46
VARS-222ENST00000470953 TCP11X2Q5H9J9 407 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 RAB41Q5JT25 222 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 ADGRF1Q5T601 910 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 PIK3R6Q5UE93 754 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 BSPRYQ5W0U4 402 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 NADSYN1Q6IA69 706 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 CAVIN1Q6NZI2 390 aaKnown RBP5.94□□□□□ -1.46
VARS-222ENST00000470953 PMF1Q6P1K2 205 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 DENND1BQ6P3S1 775 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 BNC2Q6ZN30 1099 aaPredicted RBP5.94□□□□□ -1.46
VARS-222ENST00000470953 CCNJLQ8IV13 435 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 MFN1Q8IWA4 741 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 UBR7Q8N806 425 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 ARL10Q8N8L6 244 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 KDM1BQ8NB78 822 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 C1orf131Q8NDD1 294 aaKnown RBP5.94□□□□□ -1.46
VARS-222ENST00000470953 PCDH19Q8TAB3 1148 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 FIBINQ8TAL6 211 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 LMO3Q8TAP4 145 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 GPT2Q8TD30 523 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 ITLN2Q8WWU7 325 aaPredicted RBP5.94□□□□□ -1.46
VARS-222ENST00000470953 KCTD13Q8WZ19 329 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 IRGQQ8WZA9 623 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 STARD8Q92502 1023 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 NINJ1Q92982 152 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 GLMNQ92990 594 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 RNF34Q969K3 372 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 RNF31Q96EP0 1072 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 HSFY1Q96LI6 401 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 PRICKLE1Q96MT3 831 aaPredicted RBP5.94□□□□□ -1.46
VARS-222ENST00000470953 KREMEN1Q96MU8 473 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 SPAG5Q96R06 1193 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 MED15Q96RN5 788 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 B3GNT4Q9C0J1 378 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 GPN2Q9H9Y4 310 aaPredicted RBP5.94□□□□□ -1.46
VARS-222ENST00000470953 RDH14Q9HBH5 336 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 SEPT11Q9NVA2 429 aaKnown RBP5.94□□□□□ -1.46
VARS-222ENST00000470953 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.94□□□□□ -1.46
VARS-222ENST00000470953 COX16Q9P0S2 106 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 SPASTQ9UBP0 616 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 APOBEC3BQ9UH17 382 aaKnown RBP5.94□□□□□ -1.46
VARS-222ENST00000470953 DNAJC12Q9UKB3 198 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 PILRAQ9UKJ1 303 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 NAALADL1Q9UQQ1 740 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 OSGIN2Q9Y236 505 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 HBS1LQ9Y450 684 aaKnown RBP5.94□□□□□ -1.46
VARS-222ENST00000470953 HS3ST3A1Q9Y663 406 aa5.94□□□□□ -1.46
VARS-222ENST00000470953 BECN2A8MW95 431 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 E5RJQ4 531 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 RNF225M0QZC1 329 aaPredicted RBP5.93□□□□□ -1.46
VARS-222ENST00000470953 RIOK3O14730 519 aaKnown RBP5.93□□□□□ -1.46
VARS-222ENST00000470953 SRPRAP08240 638 aaKnown RBP5.93□□□□□ -1.46
VARS-222ENST00000470953 TCN2P20062 427 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 PTMSP20962 102 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 VARSP26640 1264 aaKnown RBP5.93□□□□□ -1.46
VARS-222ENST00000470953 TBX4P57082 545 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 MCCD1P59942 119 aaPredicted RBP5.93□□□□□ -1.46
VARS-222ENST00000470953 APBA1Q02410 837 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 TYRO3Q06418 890 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 CDH18Q13634 790 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 MEA1Q16626 185 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms