RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 TERTO14746 1132 aaKnown RBP13.19□□□□□ -0.3
PTPN7-207ENST00000468385 ITGB2P05107 769 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 JMJD7P0C870 316 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 MMP8P22894 467 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 HTR1BP28222 390 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 ETV5P41161 510 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 PTPN9P43378 593 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 SUOXP51687 545 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 NFKB2Q00653 900 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 ZFP36L1Q07352 338 aaKnown RBP13.19□□□□□ -0.3
PTPN7-207ENST00000468385 INPP5AQ14642 412 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 AGERQ15109 404 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 CYTH1Q15438 398 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 TPD52L1Q16890 204 aaPredicted RBP13.19□□□□□ -0.3
PTPN7-207ENST00000468385 ZNF354CQ86Y25 554 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 CCNJLQ8IV13 435 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 MLKLQ8NB16 471 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 HCAR2Q8TDS4 363 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 FAM172AQ8WUF8 416 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 SLC20A1Q8WUM9 679 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 NTAN1Q96AB6 310 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 PDXPQ96GD0 296 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 EXOC2Q96KP1 924 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 RBM15Q96T37 977 aaKnown RBP eCLIP13.19□□□□□ -0.3
PTPN7-207ENST00000468385 STK33Q9BYT3 514 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 PCDH12Q9NPG4 1184 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 LHX3Q9UBR4 397 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 KLQ9UEF7 1012 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 NOCTQ9UK39 431 aaKnown RBP13.19□□□□□ -0.3
PTPN7-207ENST00000468385 APPL1Q9UKG1 709 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 BOD1L1Q8NFC6 3051 aa13.19□□□□□ -0.3
PTPN7-207ENST00000468385 LRRK1Q38SD2 2015 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 PRAMEF33A0A0G2JMD5 474 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 PRAMEF10O60809 474 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 TNFP01375 233 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 PCCBP05166 539 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 CHRNB2P17787 502 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 XPAP23025 273 aaPredicted RBP13.18□□□□□ -0.3
PTPN7-207ENST00000468385 LIG3P49916 1009 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 FMO1Q01740 532 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 PTP4A2Q12974 167 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 UGP2Q16851 508 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 HSP90AA4PQ58FG1 418 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 CERCAMQ5T4B2 595 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 OGFOD3Q6PK18 319 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 TMPRSS9Q7Z410 1059 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 ZNF677Q86XU0 584 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 FAM114A1Q8IWE2 563 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 SFTPA2Q8IWL1 248 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 PYROXD2Q8N2H3 581 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 RTL3Q8N8U3 475 aaKnown RBP13.18□□□□□ -0.3
PTPN7-207ENST00000468385 Q8N9G6 341 aaPredicted RBP13.18□□□□□ -0.3
PTPN7-207ENST00000468385 SPDYE1Q8NFV5 336 aaPredicted RBP13.18□□□□□ -0.3
PTPN7-207ENST00000468385 SLC30A5Q8TAD4 765 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 HMCESQ96FZ2 354 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 WDR92Q96MX6 357 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 C11orf70Q9BRQ4 267 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 ARHGAP9Q9BRR9 750 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 SUV39H2Q9H5I1 410 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 FOXJ2Q9P0K8 574 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 DAAM1Q9Y4D1 1078 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 DGKBQ9Y6T7 804 aa13.18□□□□□ -0.3
PTPN7-207ENST00000468385 MAST4O15021 2626 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 C9orf172C9J069 976 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 RASA4BC9J798 803 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 AGRPO00253 132 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 RASA4O43374 803 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 PRKCGP05129 697 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 FAM87AP0C7U9 286 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 PNLIPP16233 465 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 GLB1P16278 677 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 WT1P19544 449 aaPredicted RBP13.17□□□□□ -0.3
PTPN7-207ENST00000468385 EPHB2P29323 1055 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 MMP12P39900 470 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 YBEYP58557 167 aaPredicted RBP13.17□□□□□ -0.3
PTPN7-207ENST00000468385 CDR2Q01850 454 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 MTM1Q13496 603 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 SERINC3Q13530 473 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 MANEAQ5SRI9 462 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 SPRED1Q7Z699 444 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 VASH2Q86V25 355 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 ZFAND4Q86XD8 727 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 ZSWIM9Q86XI8 627 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 DTX1Q86Y01 620 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 DNAAF5Q86Y56 855 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 SLITRK4Q8IW52 837 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 PLA2G15Q8NCC3 412 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 ATL2Q8NHH9 583 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 OR1E3Q8WZA6 343 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 USP7Q93009 1102 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 TMEM159Q96B96 161 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 NCAPGQ9BPX3 1015 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 MRPL40Q9NQ50 206 aaKnown RBP13.17□□□□□ -0.3
PTPN7-207ENST00000468385 RYDENQ9NUL5 291 aaKnown RBP13.17□□□□□ -0.3
PTPN7-207ENST00000468385 SEPT10Q9P0V9 454 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 PCDHGA4Q9Y5G9 962 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 RNF215Q9Y6U7 377 aa13.17□□□□□ -0.3
PTPN7-207ENST00000468385 AHCTF1Q8WYP5 2266 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 TMEM202A6NGA9 273 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 WASH4PA8MWX3 477 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms