RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 CNPY3Q9BT09 278 aa17.42■□□□□ 0.38
TRIM56-203ENST00000467847 PCDH12Q9NPG4 1184 aa17.42■□□□□ 0.38
TRIM56-203ENST00000467847 SIRPGQ9P1W8 387 aa17.42■□□□□ 0.38
TRIM56-203ENST00000467847 CCDC187A0A096LP49 1063 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 TCRBV5S1A1TA0A578 114 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 TSPAN11A1L157 253 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 TNFSF15O95150 251 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 RASGRP1O95267 797 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 DESP17661 470 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 TPI1P60174 286 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 VAC14Q08AM6 782 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 INPP5AQ14642 412 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 GRM3Q14832 879 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 NFATC4Q14934 902 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 UGP2Q16851 508 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 ALG11Q2TAA5 492 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 DCUN1D2Q6PH85 259 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 LVRNQ6Q4G3 990 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 ENPP7Q6UWV6 458 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 RD3Q7Z3Z2 195 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 ANKRD20A12PQ8NF67 263 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 WBP1Q96G27 269 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 AGPAT1Q99943 283 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.41■□□□□ 0.38
TRIM56-203ENST00000467847 EDEM3Q9BZQ6 932 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 SUV39H2Q9H5I1 410 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 OR1A2Q9Y585 309 aa17.41■□□□□ 0.38
TRIM56-203ENST00000467847 LGALS16A8MUM7 142 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 CDRT15L2A8MXV6 281 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 J3KR12 359 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 ARHGAP6O43182 974 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 LIG3P49916 1009 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 SRP54P61011 504 aaKnown RBP17.4■□□□□ 0.38
TRIM56-203ENST00000467847 SKOR1P84550 965 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 KCNC4Q03721 635 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 UBXN1Q04323 297 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 PPP1R15BQ5SWA1 713 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 BRAT1Q6PJG6 821 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 GKN2Q86XP6 184 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 ATL2Q8NHH9 583 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 CCDC74AQ96AQ1 378 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 ZNF641Q96N77 438 aaPredicted RBP17.4■□□□□ 0.38
TRIM56-203ENST00000467847 APOOQ9BUR5 198 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 LRRC19Q9H756 370 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 PDFQ9HBH1 243 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 DONSONQ9NYP3 566 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 KLQ9UEF7 1012 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 GPR34Q9UPC5 381 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 PIEZO2Q9H5I5 2752 aa17.4■□□□□ 0.38
TRIM56-203ENST00000467847 UNC13CQ8NB66 2214 aa17.39■□□□□ 0.37
TRIM56-203ENST00000467847 NTN3O00634 580 aaPredicted RBP17.39■□□□□ 0.37
TRIM56-203ENST00000467847 BUB1BO60566 1050 aaPredicted RBP17.39■□□□□ 0.37
TRIM56-203ENST00000467847 PRAMEF11O60813 436 aa17.39■□□□□ 0.37
TRIM56-203ENST00000467847 PCCBP05166 539 aa17.39■□□□□ 0.37
TRIM56-203ENST00000467847 ITGA2BP08514 1039 aa17.39■□□□□ 0.37
TRIM56-203ENST00000467847 HTR7P34969 479 aa17.39■□□□□ 0.37
TRIM56-203ENST00000467847 MMP12P39900 470 aa17.39■□□□□ 0.37
TRIM56-203ENST00000467847 MLLT3P42568 568 aaPredicted RBP17.39■□□□□ 0.37
TRIM56-203ENST00000467847 NDST2P52849 883 aa17.39■□□□□ 0.37
TRIM56-203ENST00000467847 CLEC14AQ86T13 490 aa17.39■□□□□ 0.37
TRIM56-203ENST00000467847 CAMK1DQ8IU85 385 aa17.39■□□□□ 0.37
TRIM56-203ENST00000467847 SDR16C5Q8N3Y7 309 aa17.39■□□□□ 0.37
TRIM56-203ENST00000467847 SNRNP27Q8WVK2 155 aaKnown RBP17.39■□□□□ 0.37
TRIM56-203ENST00000467847 CELF6Q96J87 481 aaKnown RBP17.39■□□□□ 0.37
TRIM56-203ENST00000467847 GFM1Q96RP9 751 aaKnown RBP17.39■□□□□ 0.37
TRIM56-203ENST00000467847 TUBGCP5Q96RT8 1024 aa17.39■□□□□ 0.37
TRIM56-203ENST00000467847 EPB41L5Q9HCM4 733 aa17.39■□□□□ 0.37
TRIM56-203ENST00000467847 LIMA1Q9UHB6 759 aaKnown RBP17.39■□□□□ 0.37
TRIM56-203ENST00000467847 RABGEF1Q9UJ41 708 aa17.39■□□□□ 0.37
TRIM56-203ENST00000467847 SSUH2Q9Y2M2 353 aa17.39■□□□□ 0.37
TRIM56-203ENST00000467847 ATP8A1Q9Y2Q0 1164 aa17.39■□□□□ 0.37
TRIM56-203ENST00000467847 HECTD1Q9ULT8 2610 aa17.39■□□□□ 0.37
TRIM56-203ENST00000467847 MYO18BQ8IUG5 2567 aa17.38■□□□□ 0.37
TRIM56-203ENST00000467847 PRKCGP05129 697 aa17.38■□□□□ 0.37
TRIM56-203ENST00000467847 RPLP0P05388 317 aaKnown RBP17.38■□□□□ 0.37
TRIM56-203ENST00000467847 SERPINA4P29622 427 aa17.38■□□□□ 0.37
TRIM56-203ENST00000467847 PAPOLAP51003 745 aaKnown RBP17.38■□□□□ 0.37
TRIM56-203ENST00000467847 OGDHQ02218 1023 aa17.38■□□□□ 0.37
TRIM56-203ENST00000467847 MTM1Q13496 603 aa17.38■□□□□ 0.37
TRIM56-203ENST00000467847 AGERQ15109 404 aa17.38■□□□□ 0.37
TRIM56-203ENST00000467847 ACAD10Q6JQN1 1059 aa17.38■□□□□ 0.37
TRIM56-203ENST00000467847 NYAP1Q6ZVC0 841 aa17.38■□□□□ 0.37
TRIM56-203ENST00000467847 B3GNT8Q7Z7M8 397 aa17.38■□□□□ 0.37
TRIM56-203ENST00000467847 ZSWIM9Q86XI8 627 aa17.38■□□□□ 0.37
TRIM56-203ENST00000467847 MCOLN2Q8IZK6 566 aa17.38■□□□□ 0.37
TRIM56-203ENST00000467847 LIN37Q96GY3 246 aaPredicted RBP17.38■□□□□ 0.37
TRIM56-203ENST00000467847 WDR92Q96MX6 357 aa17.38■□□□□ 0.37
TRIM56-203ENST00000467847 ATP13A3Q9H7F0 1226 aa17.38■□□□□ 0.37
TRIM56-203ENST00000467847 GPATCH2LQ9NWQ4 482 aa17.38■□□□□ 0.37
TRIM56-203ENST00000467847 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.38■□□□□ 0.37
TRIM56-203ENST00000467847 AP4E1Q9UPM8 1137 aa17.38■□□□□ 0.37
TRIM56-203ENST00000467847 AHCTF1Q8WYP5 2266 aa17.37■□□□□ 0.37
TRIM56-203ENST00000467847 ARHGAP42A6NI28 874 aa17.37■□□□□ 0.37
TRIM56-203ENST00000467847 D6RAR5 112 aa17.37■□□□□ 0.37
TRIM56-203ENST00000467847 K7ENP7 123 aa17.37■□□□□ 0.37
TRIM56-203ENST00000467847 EEF2KO00418 725 aaKnown RBP17.37■□□□□ 0.37
TRIM56-203ENST00000467847 PLD2O14939 933 aa17.37■□□□□ 0.37
TRIM56-203ENST00000467847 PALMO75781 387 aa17.37■□□□□ 0.37
TRIM56-203ENST00000467847 TNFP01375 233 aa17.37■□□□□ 0.37
TRIM56-203ENST00000467847 CCDC172P0C7W6 258 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms