RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 RAI2Q9Y5P3 530 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 ERI2A8K979 691 aaKnown RBP6.92□□□□□ -1.3
SCAF4-204ENST00000467731 TRAFD1O14545 582 aaPredicted RBP6.92□□□□□ -1.3
SCAF4-204ENST00000467731 LEFTY1O75610 366 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 KLF8O95600 359 aaPredicted RBP6.92□□□□□ -1.3
SCAF4-204ENST00000467731 POP4O95707 220 aaKnown RBP6.92□□□□□ -1.3
SCAF4-204ENST00000467731 AGTP01019 485 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 UGT2B4P06133 528 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 PDHA1P08559 390 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 OAS2P29728 719 aaKnown RBP6.92□□□□□ -1.3
SCAF4-204ENST00000467731 MAPK8P45983 427 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 MRPS21P82921 87 aaKnown RBP6.92□□□□□ -1.3
SCAF4-204ENST00000467731 ZXDAP98168 799 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 RAD51Q06609 339 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 BCL2L1Q07817 233 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 CUL1Q13616 776 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 ELAVL3Q14576 367 aaKnown RBP6.92□□□□□ -1.3
SCAF4-204ENST00000467731 E2F5Q15329 346 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 PKN3Q6P5Z2 889 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 ZNF534Q76KX8 674 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 GSPT2Q8IYD1 628 aaKnown RBP6.92□□□□□ -1.3
SCAF4-204ENST00000467731 BBOF1Q8ND07 529 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 RUBCNQ92622 972 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 PWWP2AQ96N64 755 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 UHRF1Q96T88 793 aaPredicted RBP6.92□□□□□ -1.3
SCAF4-204ENST00000467731 GABRG3Q99928 467 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 HEPHQ9BQS7 1158 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 FICDQ9BVA6 458 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 PARD6BQ9BYG5 372 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 CPEB1Q9BZB8 566 aaKnown RBP6.92□□□□□ -1.3
SCAF4-204ENST00000467731 ATP13A3Q9H7F0 1226 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 TBC1D17Q9HA65 648 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 PRSS16Q9NQE7 514 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 ZDHHC18Q9NUE0 388 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 IL36AQ9UHA7 158 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 SARDHQ9UL12 918 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 G3BP2Q9UN86 482 aaKnown RBP6.92□□□□□ -1.3
SCAF4-204ENST00000467731 CHKBQ9Y259 395 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 MRPS17Q9Y2R5 130 aaKnown RBP6.92□□□□□ -1.3
SCAF4-204ENST00000467731 WASF2Q9Y6W5 498 aa6.92□□□□□ -1.3
SCAF4-204ENST00000467731 CACNA1IQ9P0X4 2223 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.91□□□□□ -1.3
SCAF4-204ENST00000467731 FAM170BA6NMN3 283 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 CHUKO15111 745 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 AVILO75366 819 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 SUN1O94901 812 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 HOXB2P14652 356 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 SERPINA4P29622 427 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 ADRA1AP35348 466 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 CHRNA4P43681 627 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 SESN3P58005 492 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 CDK16Q00536 496 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 CDK18Q07002 472 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 FZD5Q13467 585 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 GALNT3Q14435 633 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 SLC14A2Q15849 920 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 POM121L1PQ3SYA9 428 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 ARSIQ5FYB1 569 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 NAPEPLDQ6IQ20 393 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 SDE2Q6IQ49 451 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 KIAA1211LQ6NV74 962 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 WDR93Q6P2C0 686 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 RANBP10Q6VN20 620 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 TRMT11Q7Z4G4 463 aaKnown RBP6.91□□□□□ -1.3
SCAF4-204ENST00000467731 CACUL1Q86Y37 369 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 OR52K1Q8NGK4 314 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 OR8D1Q8WZ84 308 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 IFT43Q96FT9 208 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 SERPINB12Q96P63 405 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 TRIB3Q96RU7 358 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 TBL1YQ9BQ87 522 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 IRF2BPLQ9H1B7 796 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 LMAN1LQ9HAT1 526 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 SPATA7Q9P0W8 599 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 PCDHB9Q9Y5E1 797 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 DOCK9Q9BZ29 2069 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 LOC285095A0A1B0GVY8 99 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 A0A1W2PQF6 199 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 STK25O00506 426 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 NDC80O14777 642 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 HTRA2O43464 458 aaPredicted RBP6.91□□□□□ -1.3
SCAF4-204ENST00000467731 FZD6O60353 706 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 SYNCRIPO60506 623 aaKnown RBP6.91□□□□□ -1.3
SCAF4-204ENST00000467731 SOCS5O75159 536 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 PRLP01236 227 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 IL1BP01584 269 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 TNFRSF8P28908 595 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 METAP1P53582 386 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 CAV1Q03135 178 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 CAMK2GQ13555 558 aaPredicted RBP6.91□□□□□ -1.3
SCAF4-204ENST00000467731 LAMB3Q13751 1172 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 GRM3Q14832 879 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 SLC1A5Q15758 541 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 LINC00523Q86TU6 105 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 CAND1Q86VP6 1230 aaKnown RBP6.91□□□□□ -1.3
SCAF4-204ENST00000467731 SLC25A41Q8N5S1 370 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 DNAAF3Q8N9W5 541 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 MCUQ8NE86 351 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 KLHL32Q96NJ5 620 aa6.91□□□□□ -1.3
SCAF4-204ENST00000467731 TUBGCP5Q96RT8 1024 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms