RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 SCAMP1O15126 338 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 IPO7O95373 1038 aaKnown RBP4.34□□□□□ -1.71
SMC4-208ENST00000467468 IL1AP01583 271 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 RB1P06400 928 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 CYP19A1P11511 503 aaPredicted RBP4.34□□□□□ -1.71
SMC4-208ENST00000467468 PRF1P14222 555 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 ST6GAL1P15907 406 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 GABRB1P18505 474 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 SCP2P22307 547 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 HOXA7P31268 230 aaPredicted RBP4.34□□□□□ -1.71
SMC4-208ENST00000467468 CDAP32320 146 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 ME1P48163 572 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 PIP4K2AP48426 406 aaPredicted RBP4.34□□□□□ -1.71
SMC4-208ENST00000467468 CYP2J2P51589 502 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 HSD17B4P51659 736 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 ARSFP54793 590 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 KRT83P78385 493 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 KYNUQ16719 465 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 ME3Q16798 604 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 ALG11Q2TAA5 492 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 BMP2KLQ5H9B9 411 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 EARS2Q5JPH6 523 aaKnown RBP4.34□□□□□ -1.71
SMC4-208ENST00000467468 TMEM268Q5VZI3 342 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 JADE1Q6IE81 842 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 TSSK4Q6SA08 328 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 GPAT4Q86UL3 456 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 GLCCI1Q86VQ1 547 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 ARFGAP1Q8N6T3 406 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 TMEM217Q8N7C4 229 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 NRACQ8N912 160 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 POC5Q8NA72 575 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 KCTD6Q8NC69 237 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 GDPD5Q8WTR4 605 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 HDAC7Q8WUI4 952 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 FAR1Q8WVX9 515 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 SCNM1Q9BWG6 230 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 RSPH9Q9H1X1 276 aaPredicted RBP4.34□□□□□ -1.71
SMC4-208ENST00000467468 CCDC177Q9NQR7 707 aaPredicted RBP4.34□□□□□ -1.71
SMC4-208ENST00000467468 ASAH2Q9NR71 780 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 PAPOLBQ9NRJ5 636 aaKnown RBP4.34□□□□□ -1.71
SMC4-208ENST00000467468 RRP7BPQ9NSQ0 103 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 GIMAP4Q9NUV9 329 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 POT1Q9NUX5 634 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 DLGAP2Q9P1A6 1054 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 SLC8A2Q9UPR5 921 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 HS3ST3B1Q9Y662 390 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 ADGRF5Q8IZF2 1346 aa4.34□□□□□ -1.71
SMC4-208ENST00000467468 MST1RQ04912 1400 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 SLC22A23A1A5C7 686 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 FAM90A8PA6NJQ4 464 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 GLOD5A6NK44 160 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 BTBD18B2RXH4 712 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 IFNL4K9M1U5 179 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 SNAP23O00161 211 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 PRPF4O43172 522 aaKnown RBP eCLIP4.33□□□□□ -1.72
SMC4-208ENST00000467468 FAM90A13PP0C7W8 464 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 FAM90A24PP0C7X0 464 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 SLC2A4P14672 509 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 PTPN2P17706 415 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 SAT1P21673 171 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 TBXAS1P24557 533 aaPredicted RBP4.33□□□□□ -1.72
SMC4-208ENST00000467468 HOXA13P31271 388 aaPredicted RBP4.33□□□□□ -1.72
SMC4-208ENST00000467468 GNAQP50148 359 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 MRPL12P52815 198 aaKnown RBP4.33□□□□□ -1.72
SMC4-208ENST00000467468 POLGP54098 1239 aaPredicted RBP4.33□□□□□ -1.72
SMC4-208ENST00000467468 HDAC4P56524 1084 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 HNRNPA0Q13151 305 aaKnown RBP4.33□□□□□ -1.72
SMC4-208ENST00000467468 OLIG2Q13516 323 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 PCLAFQ15004 111 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 PLCB4Q15147 1175 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 HIST2H2ACQ16777 129 aaPredicted RBP4.33□□□□□ -1.72
SMC4-208ENST00000467468 ASTE1Q2TB18 679 aaPredicted RBP4.33□□□□□ -1.72
SMC4-208ENST00000467468 HECTD3Q5T447 861 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 TBC1D9BQ66K14 1250 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 GLDNQ6ZMI3 551 aaPredicted RBP4.33□□□□□ -1.72
SMC4-208ENST00000467468 GSTA5Q7RTV2 222 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 PIM3Q86V86 326 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 VSIG1Q86XK7 387 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 ADGRF4Q8IZF3 695 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 PRPF31Q8WWY3 499 aaKnown RBP4.33□□□□□ -1.72
SMC4-208ENST00000467468 SLC22A18Q96BI1 424 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 FOXP1Q9H334 677 aaPredicted RBP4.33□□□□□ -1.72
SMC4-208ENST00000467468 PLEKHA4Q9H4M7 779 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 RABEP2Q9H5N1 569 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 SLC35C2Q9NQQ7 365 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 SLC6A13Q9NSD5 602 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 TTC3P53804 2025 aa4.33□□□□□ -1.72
SMC4-208ENST00000467468 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
SMC4-208ENST00000467468 LY6G6EA0A0G2JKS1 128 aa4.32□□□□□ -1.72
SMC4-208ENST00000467468 CXorf65A6NEN9 183 aa4.32□□□□□ -1.72
SMC4-208ENST00000467468 A8MV72 311 aaPredicted RBP4.32□□□□□ -1.72
SMC4-208ENST00000467468 NPIPB11E5RHQ5 1161 aa4.32□□□□□ -1.72
SMC4-208ENST00000467468 EBAG9O00559 213 aa4.32□□□□□ -1.72
SMC4-208ENST00000467468 MSI1O43347 362 aaKnown RBP4.32□□□□□ -1.72
SMC4-208ENST00000467468 HSPA4LO95757 839 aa4.32□□□□□ -1.72
SMC4-208ENST00000467468 TFP02787 698 aa4.32□□□□□ -1.72
SMC4-208ENST00000467468 SELLP14151 372 aa4.32□□□□□ -1.72
SMC4-208ENST00000467468 CHRNA5P30532 468 aa4.32□□□□□ -1.72
SMC4-208ENST00000467468 SLC15A1P46059 708 aa4.32□□□□□ -1.72
SMC4-208ENST00000467468 NRIP1P48552 1158 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms