RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 STEAP3Q658P3 488 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 CLEC18BQ6UXF7 455 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 LIMS2Q7Z4I7 341 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 ADGRF2Q8IZF7 708 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 SYT2Q8N9I0 419 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-207ENST00000467273 CLEC18CQ8NCF0 446 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 CLRN3Q8NCR9 226 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 UHMK1Q8TAS1 419 aaKnown RBP5.67□□□□□ -1.5
PTCD3-207ENST00000467273 MYCBPAPQ8TBZ2 947 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 CACTINQ8WUQ7 758 aaKnown RBP5.67□□□□□ -1.5
PTCD3-207ENST00000467273 SNX19Q92543 992 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 BIRC7Q96CA5 298 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 TRIM44Q96DX7 344 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-207ENST00000467273 BBS2Q9BXC9 721 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 ELOVL4Q9GZR5 314 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 BTBD1Q9H0C5 482 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 SGK2Q9HBY8 427 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 COMMD8Q9NX08 183 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 LSM7Q9UK45 103 aaKnown RBP5.67□□□□□ -1.5
PTCD3-207ENST00000467273 ITGA11Q9UKX5 1188 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 NOL7Q9UMY1 257 aaKnown RBP5.67□□□□□ -1.5
PTCD3-207ENST00000467273 SCML1Q9UN30 329 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 TSC22D4Q9Y3Q8 395 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 STYXL1Q9Y6J8 313 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 CREBBPQ92793 2442 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 FBN2P35556 2912 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 ITPR2Q14571 2701 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 A0A1W2PPC4 97 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 FAM92AA1XBS5 289 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 WASH3PC4AMC7 463 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 E9PMD0 336 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 F8VP50 259 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 HGSO14964 777 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-207ENST00000467273 TRIM24O15164 1050 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 REC8O95072 547 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 MT-CO3P00414 261 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 LTFP02788 710 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 GP1BAP07359 652 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 GLI4P10075 376 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 ACAT1P24752 427 aaKnown RBP5.66□□□□□ -1.5
PTCD3-207ENST00000467273 YWHAQP27348 245 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 EPHA8P29322 1005 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-207ENST00000467273 KIF11P52732 1056 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 TERF1P54274 439 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 RIPPLY3P57055 190 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 POSTNQ15063 836 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 ZNF174Q15697 407 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 SOWAHAQ2M3V2 549 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 TMEM95Q3KNT9 176 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 ARL13BQ3SXY8 428 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 TTC31Q49AM3 519 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-207ENST00000467273 EMC4Q5J8M3 183 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 HYIQ5T013 277 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 PPP4R4Q6NUP7 873 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 KLHDC10Q6PID8 442 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 KANSL1Q7Z3B3 1105 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 GATAD2AQ86YP4 633 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 LGI4Q8N135 537 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 NUP93Q8N1F7 819 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 EID2Q8N6I1 236 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 OR2T3Q8NH03 318 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 GOLGA1Q92805 767 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 MYLPFQ96A32 169 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 PCED1BQ96HM7 432 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 NAF1Q96HR8 494 aaKnown RBP5.66□□□□□ -1.5
PTCD3-207ENST00000467273 SYT15Q9BQS2 421 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 ZNF747Q9BV97 191 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 SLC2A11Q9BYW1 496 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 TRIM4Q9C037 500 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 ZNF700Q9H0M5 742 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 LHX5Q9H2C1 402 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 MS4A5Q9H3V2 200 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 C6orf106Q9H6K1 298 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-207ENST00000467273 ASCL3Q9NQ33 180 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 GDF3Q9NR23 364 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 IL37Q9NZH6 218 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 AGO2Q9UKV8 859 aaKnown RBP5.66□□□□□ -1.5
PTCD3-207ENST00000467273 AGAP1Q9UPQ3 857 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 ZNF510Q9Y2H8 683 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 SPO11Q9Y5K1 396 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 SNX9Q9Y5X1 595 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 ATP23Q9Y6H3 246 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 PTPRJQ12913 1337 aa5.66□□□□□ -1.5
PTCD3-207ENST00000467273 LRBAP50851 2863 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 DOPEY1Q5JWR5 2465 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 SLC26A4O43511 780 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 MAGEC1O60732 1142 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 PENKP01210 267 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-207ENST00000467273 MYL1P05976 194 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 ZDHHC11BP0C7U3 371 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 FDPSP14324 419 aaKnown RBP5.65□□□□□ -1.5
PTCD3-207ENST00000467273 WARSP23381 471 aaKnown RBP5.65□□□□□ -1.5
PTCD3-207ENST00000467273 PTX3P26022 381 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-207ENST00000467273 CD38P28907 300 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 ACSL1P33121 698 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 CHKAP35790 457 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 NUDT1P36639 197 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 PRPHP41219 470 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 HARS2P49590 506 aaKnown RBP5.65□□□□□ -1.5
PTCD3-207ENST00000467273 ACOT2P49753 483 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms