RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 ZNF358Q9NW07 568 aa18.18■□□□□ 0.5
SNAPC3-205ENST00000467062 CLDN25C9JDP6 229 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 PTGESO14684 152 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 AKAP10O43572 662 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 CD4P01730 458 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 ALDOAP04075 364 aaKnown RBP18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 SERPINB5P36952 375 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 TKTL1P51854 596 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 PGGT1BP53609 377 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 ATXN3P54252 364 aaPredicted RBP18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 TPTEP56180 551 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 PAN2Q504Q3 1202 aaKnown RBP18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 PPM1LQ5SGD2 360 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 FAAH2Q6GMR7 532 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 PID1Q7Z2X4 250 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 ZNF467Q7Z7K2 595 aaPredicted RBP18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 ZNF567Q8N184 647 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 ARNTL2Q8WYA1 636 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 LRTOMTQ8WZ04 291 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 USP13Q92995 863 aaPredicted RBP18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 SLC29A1Q99808 456 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 APOL2Q9BQE5 337 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 SYBUQ9NX95 663 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 MOCS1Q9NZB8 636 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 SMIM35A0A1B0GVV1 85 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 YJEFN3A6XGL0 299 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 GSRP00390 522 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 FAM117BQ6P1L5 589 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 EPGNQ6UW88 154 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 ZBTB49Q6ZSB9 765 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 CLEC20AQ6ZU45 233 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 HACE1Q8IYU2 909 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 EDEM1Q92611 657 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 PAAF1Q9BRP4 392 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 DUSP16Q9BY84 665 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 WDR41Q9HAD4 459 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 UBP1Q9NZI7 540 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 SATB2Q9UPW6 733 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 CDY2AQ9Y6F7 541 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 CDY1Q9Y6F8 540 aa18.17■□□□□ 0.5
SNAPC3-205ENST00000467062 TPP1O14773 563 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 ENO3P13929 434 aaPredicted RBP18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 CYP2B6P20813 491 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 MYF6P23409 242 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 ABCE1P61221 599 aaKnown RBP18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 ATG14Q6ZNE5 492 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 BPHLQ86WA6 291 aaPredicted RBP18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 RNF148Q8N7C7 305 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 CAPSLQ8WWF8 208 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 HSFY1Q96LI6 401 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 NAA50Q9GZZ1 169 aaKnown RBP18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 NANOGQ9H9S0 305 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 HMG20AQ9NP66 347 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 GDAP2Q9NXN4 497 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 MORF4L1Q9UBU8 362 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 TRAF6Q9Y4K3 522 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 DICER1Q9UPY3 1922 aaKnown RBP18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 MYBPHLA2RUH7 354 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 MBLAC1A4D2B0 266 aaPredicted RBP18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 PSMD11O00231 422 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 CSPG5O95196 566 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 FYNP06241 537 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 USP17L7P0C7H9 530 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 NPR3P17342 541 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 TPSB2P20231 275 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 RPL10P27635 214 aaKnown RBP18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 HARS2P49590 506 aaKnown RBP18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 OCA2Q04671 838 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 ART3Q13508 389 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 TPSAB1Q15661 275 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 TIFABQ6ZNK6 161 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 USP43Q70EL4 1123 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 STRADAQ7RTN6 431 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 LRRC49Q8IUZ0 686 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 OR52K1Q8NGK4 314 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 NACC2Q96BF6 587 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 CNDP1Q96KN2 507 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 TNIP3Q96KP6 325 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 CIB1Q99828 191 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 EFHD1Q9BUP0 239 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 ULBP1Q9BZM6 244 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 WDR12Q9GZL7 423 aaKnown RBP18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 RMND5AQ9H871 391 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 ACSS2Q9NR19 701 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 DUS2Q9NX74 493 aaKnown RBP18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 SNX13Q9Y5W8 968 aa18.16■□□□□ 0.5
SNAPC3-205ENST00000467062 DOCK3Q8IZD9 2030 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 GUCY1B2O75343 617 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 CTSHP09668 335 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 FGFR3P22607 806 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 HPCAL1P37235 193 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 IFITM2Q01629 132 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 PPP4R4Q6NUP7 873 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 ZBTB46Q86UZ6 589 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 LRRC39Q96DD0 335 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 MOCOSQ96EN8 888 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 ZNF560Q96MR9 790 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 COG4Q9H9E3 785 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 MRPL40Q9NQ50 206 aaKnown RBP18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 GOLGA8CPA6NN73 597 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms