RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 SCAMP3O14828 347 aaKnown RBP8.75□□□□□ -1.01
HPS4-209ENST00000466781 GRM6O15303 877 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 TOP3BO95985 862 aaKnown RBP8.75□□□□□ -1.01
HPS4-209ENST00000466781 ITPKBP27987 946 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 CBFBQ13951 182 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 TEAD4Q15561 434 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 MPPE1Q53F39 396 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 LIN54Q6MZP7 749 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 CRTC3Q6UUV7 619 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 CYP2R1Q6VVX0 501 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 TCP10LQ8TDR4 215 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 LPPQ93052 612 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 BTBD7Q9P203 1132 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 PCDHGC5Q9Y5F6 944 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 NTRK1P04629 796 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 EIF4BP23588 611 aaKnown RBP8.75□□□□□ -1.01
HPS4-209ENST00000466781 SCTRP47872 440 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 CLCN5P51795 746 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 TAS2R41P59536 307 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 PTENP60484 403 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 GRM3Q14832 879 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 ZCCHC7Q8N3Z6 543 aaKnown RBP8.75□□□□□ -1.01
HPS4-209ENST00000466781 RAD51AP1Q96B01 352 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 PPP3R2Q96LZ3 170 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 PORCNQ9H237 461 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 C3orf14Q9HBI5 128 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 CCDC177Q9NQR7 707 aaPredicted RBP8.75□□□□□ -1.01
HPS4-209ENST00000466781 SLC27A5Q9Y2P5 690 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 LTBP3Q9NS15 1303 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 ANKRD63C9JTQ0 380 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 PTGES3LE9PB15 166 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 ONECUT3O60422 494 aaPredicted RBP8.75□□□□□ -1.01
HPS4-209ENST00000466781 ATP9AO75110 1047 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 ADSLP30566 484 aaPredicted RBP8.75□□□□□ -1.01
HPS4-209ENST00000466781 GRB14Q14449 540 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 XKR4Q5GH76 650 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 FAM183BPQ6ZVS7 135 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 OAFQ86UD1 273 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 JAZF1Q86VZ6 243 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 SNX32Q86XE0 403 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 TMPRSS6Q8IU80 811 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 OFCC1Q8IZS5 231 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 C8orf59Q8N0T1 100 aaPredicted RBP8.75□□□□□ -1.01
HPS4-209ENST00000466781 ADCY4Q8NFM4 1077 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 NMD3Q96D46 503 aaKnown RBP8.75□□□□□ -1.01
HPS4-209ENST00000466781 DSN1Q9H410 356 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 TLE6Q9H808 572 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 KIAA1522Q9P206 1035 aaPredicted RBP8.75□□□□□ -1.01
HPS4-209ENST00000466781 DMGDHQ9UI17 866 aaKnown RBP8.75□□□□□ -1.01
HPS4-209ENST00000466781 CHKBQ9Y259 395 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 FRMPD4Q14CM0 1322 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 FCHO1O14526 889 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 SLC28A2O43868 658 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 MAFO75444 373 aaPredicted RBP8.75□□□□□ -1.01
HPS4-209ENST00000466781 GJB1P08034 283 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 ME2P23368 584 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 RBL1P28749 1068 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 RPL14P50914 215 aaKnown RBP8.75□□□□□ -1.01
HPS4-209ENST00000466781 ACTR3P61158 418 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 SPIBQ01892 262 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 SQLEQ14534 574 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 PTGES3Q15185 160 aaKnown RBP8.75□□□□□ -1.01
HPS4-209ENST00000466781 MAPK11Q15759 364 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 DUSP28Q4G0W2 176 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 FIGNQ5HY92 759 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 TTI2Q6NXR4 508 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 KYAT3Q6YP21 454 aaKnown RBP8.75□□□□□ -1.01
HPS4-209ENST00000466781 RAVER1Q8IY67 606 aaKnown RBP8.75□□□□□ -1.01
HPS4-209ENST00000466781 DHRSXQ8N5I4 330 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 HIC2Q96JB3 615 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 TMEM138Q9NPI0 162 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 IKZF3Q9UKT9 509 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 ST3GAL5Q9UNP4 418 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 BTBD3Q9Y2F9 522 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 MYRFQ9Y2G1 1151 aa8.75□□□□□ -1.01
HPS4-209ENST00000466781 CTPS1P17812 591 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 TBX2Q13207 712 aaPredicted RBP8.74□□□□□ -1.01
HPS4-209ENST00000466781 RRP1BQ14684 758 aaKnown RBP8.74□□□□□ -1.01
HPS4-209ENST00000466781 TMEM119Q4V9L6 283 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 ANXA8L1Q5VT79 327 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 DCLRE1AQ6PJP8 1040 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 CXXC5Q7LFL8 322 aaKnown RBP8.74□□□□□ -1.01
HPS4-209ENST00000466781 EXOC3L1Q86VI1 746 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 NAT16Q8N8M0 369 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 TTC29Q8NA56 475 aaPredicted RBP8.74□□□□□ -1.01
HPS4-209ENST00000466781 ZNF607Q96SK3 696 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 BTBD10Q9BSF8 475 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 RASSF1Q9NS23 344 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 KBTBD4Q9NVX7 518 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 ASF1AQ9Y294 204 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 SLC45A1Q9Y2W3 748 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 CAPN6Q9Y6Q1 641 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 A0A087X0B3 334 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 ZSCAN5CA6NGD5 496 aaPredicted RBP8.74□□□□□ -1.01
HPS4-209ENST00000466781 ERAL1O75616 437 aaKnown RBP8.74□□□□□ -1.01
HPS4-209ENST00000466781 IFNGP01579 166 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 HGFP14210 728 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 LAG3P18627 525 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 BUD31P41223 144 aaPredicted RBP8.74□□□□□ -1.01
HPS4-209ENST00000466781 PSMD8P48556 350 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms