RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 DPP6P42658 865 aa16.45■□□□□ 0.22
SLX4-202ENST00000466154 C1QTNF8P60827 252 aa16.45■□□□□ 0.22
SLX4-202ENST00000466154 SATB1Q01826 763 aa16.45■□□□□ 0.22
SLX4-202ENST00000466154 CEACAM7Q14002 265 aa16.45■□□□□ 0.22
SLX4-202ENST00000466154 IHHQ14623 411 aa16.45■□□□□ 0.22
SLX4-202ENST00000466154 SIRPB2Q5JXA9 342 aa16.45■□□□□ 0.22
SLX4-202ENST00000466154 CUZD1Q86UP6 607 aa16.45■□□□□ 0.22
SLX4-202ENST00000466154 ABI1Q8IZP0 508 aa16.45■□□□□ 0.22
SLX4-202ENST00000466154 SPDYE1Q8NFV5 336 aaPredicted RBP16.45■□□□□ 0.22
SLX4-202ENST00000466154 RP9Q8TA86 221 aaKnown RBP16.45■□□□□ 0.22
SLX4-202ENST00000466154 RNF217Q8TC41 542 aa16.45■□□□□ 0.22
SLX4-202ENST00000466154 DNAJC1Q96KC8 554 aaKnown RBP16.45■□□□□ 0.22
SLX4-202ENST00000466154 ZCWPW1Q9H0M4 648 aa16.45■□□□□ 0.22
SLX4-202ENST00000466154 EFCAB1Q9HAE3 211 aa16.45■□□□□ 0.22
SLX4-202ENST00000466154 TREX1Q9NSU2 369 aa16.45■□□□□ 0.22
SLX4-202ENST00000466154 ABT1Q9ULW3 272 aaKnown RBP16.45■□□□□ 0.22
SLX4-202ENST00000466154 SEPT4O43236 478 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 LTA4HP09960 611 aaKnown RBP16.44■□□□□ 0.22
SLX4-202ENST00000466154 FGFR3P22607 806 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 ARL1P40616 181 aaPredicted RBP16.44■□□□□ 0.22
SLX4-202ENST00000466154 ALDH1A3P47895 512 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 POU4F1Q01851 419 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 BTKQ06187 659 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 PTK2BQ14289 1009 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 PITRM1Q5JRX3 1037 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 VARS2Q5ST30 1063 aaKnown RBP16.44■□□□□ 0.22
SLX4-202ENST00000466154 KIAA0930Q6ICG6 404 aaPredicted RBP16.44■□□□□ 0.22
SLX4-202ENST00000466154 RGMBQ6NW40 437 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 DCP1BQ8IZD4 617 aaKnown RBP16.44■□□□□ 0.22
SLX4-202ENST00000466154 GATA6Q92908 595 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 PPP2R3CQ969Q6 453 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 MYEOVQ96EZ4 313 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 SMIM14Q96QK8 99 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 SLC39A3Q9BRY0 314 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 IGSF5Q9NSI5 407 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 VWA7Q9Y334 891 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 PDE4DIPQ5VU43 2346 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 A0A0U1RQS6 177 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 SIX3O95343 332 aaPredicted RBP16.44■□□□□ 0.22
SLX4-202ENST00000466154 KIF19Q2TAC6 998 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 MANEALQ5VSG8 457 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 OR52E8Q6IFG1 317 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 PDSS2Q86YH6 399 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 OR13J1Q8NGT2 312 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 CEP70Q8NHQ1 597 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 CCSER2Q9H7U1 834 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 CLIC5Q9NZA1 410 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 VTI1BQ9UEU0 232 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 FAM50BQ9Y247 325 aa16.44■□□□□ 0.22
SLX4-202ENST00000466154 PPP6CO00743 305 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 SDHDO14521 159 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 IPO13O94829 963 aaKnown RBP16.43■□□□□ 0.22
SLX4-202ENST00000466154 CSPG5O95196 566 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 KCNC1P48547 511 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 KPNA2P52292 529 aaKnown RBP16.43■□□□□ 0.22
SLX4-202ENST00000466154 SULT2A1Q06520 285 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 CLLU1OSQ5K130 101 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 RTN4RL1Q86UN2 441 aaPredicted RBP16.43■□□□□ 0.22
SLX4-202ENST00000466154 SLC45A3Q96JT2 553 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 MRPL1Q9BYD6 325 aaKnown RBP16.43■□□□□ 0.22
SLX4-202ENST00000466154 VCX3BQ9H321 246 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 ZBTB26Q9HCK0 441 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 A0A087X1B8 175 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 TARM1B6A8C7 271 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 DNAJB2P25686 324 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 MSLNQ13421 630 aaPredicted RBP16.43■□□□□ 0.22
SLX4-202ENST00000466154 KDELC1Q6UW63 502 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 PIWIL4Q7Z3Z4 852 aaKnown RBP16.43■□□□□ 0.22
SLX4-202ENST00000466154 DDIASQ8IXT1 998 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 CALML6Q8TD86 181 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 BHMTQ93088 406 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 RMDN1Q96DB5 314 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 CNBD2Q96M20 576 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 PRKD2Q9BZL6 878 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 STK39Q9UEW8 545 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 TLR6Q9Y2C9 796 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 PCDHB5Q9Y5E4 795 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 UBDO15205 165 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 ETS2P15036 469 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 KCNQ1P51787 676 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 FCGRTP55899 365 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 HNRNPDQ14103 355 aaKnown RBP16.43■□□□□ 0.22
SLX4-202ENST00000466154 FASTKQ14296 549 aaKnown RBP16.43■□□□□ 0.22
SLX4-202ENST00000466154 LBRQ14739 615 aaKnown RBP16.43■□□□□ 0.22
SLX4-202ENST00000466154 PGBD5Q8N414 524 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 PIP4K2CQ8TBX8 421 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 NAT14Q8WUY8 206 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 PCDHB8Q9UN66 801 aa16.43■□□□□ 0.22
SLX4-202ENST00000466154 A0A0D9SEW6 157 aa16.42■□□□□ 0.22
SLX4-202ENST00000466154 TRPC5OSA6NMA1 111 aa16.42■□□□□ 0.22
SLX4-202ENST00000466154 CACNG3O60359 315 aa16.42■□□□□ 0.22
SLX4-202ENST00000466154 TSPAN3O60637 253 aa16.42■□□□□ 0.22
SLX4-202ENST00000466154 DNAJA2O60884 412 aa16.42■□□□□ 0.22
SLX4-202ENST00000466154 PGM3O95394 542 aa16.42■□□□□ 0.22
SLX4-202ENST00000466154 COL6A2P12110 1019 aa16.42■□□□□ 0.22
SLX4-202ENST00000466154 VCLP18206 1134 aa16.42■□□□□ 0.22
SLX4-202ENST00000466154 PFKFB4Q16877 469 aa16.42■□□□□ 0.22
SLX4-202ENST00000466154 CMPK2Q5EBM0 449 aa16.42■□□□□ 0.22
SLX4-202ENST00000466154 CILP2Q8IUL8 1156 aa16.42■□□□□ 0.22
SLX4-202ENST00000466154 CNTN4Q8IWV2 1026 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms