RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 ELP6Q0PNE2 266 aa26.1■■□□□ 1.77
SMC4-206ENST00000465903 ZBTB17Q13105 803 aa26.1■■□□□ 1.77
SMC4-206ENST00000465903 SLC45A4Q5BKX6 768 aa26.1■■□□□ 1.77
SMC4-206ENST00000465903 CFAP58Q5T655 872 aa26.1■■□□□ 1.77
SMC4-206ENST00000465903 GCNT7Q6ZNI0 430 aa26.1■■□□□ 1.77
SMC4-206ENST00000465903 DGLUCYQ7Z3D6 616 aa26.1■■□□□ 1.77
SMC4-206ENST00000465903 IQCHQ86VS3 1027 aa26.1■■□□□ 1.77
SMC4-206ENST00000465903 SPATS2Q86XZ4 545 aaKnown RBP26.1■■□□□ 1.77
SMC4-206ENST00000465903 CCDC50Q8IVM0 306 aa26.1■■□□□ 1.77
SMC4-206ENST00000465903 CNTD1Q8N815 330 aa26.1■■□□□ 1.77
SMC4-206ENST00000465903 ALG3Q92685 438 aa26.1■■□□□ 1.77
SMC4-206ENST00000465903 BMFQ96LC9 184 aa26.1■■□□□ 1.77
SMC4-206ENST00000465903 LENG8Q96PV6 779 aaPredicted RBP26.1■■□□□ 1.77
SMC4-206ENST00000465903 POLR1EQ9GZS1 481 aaKnown RBP26.1■■□□□ 1.77
SMC4-206ENST00000465903 AMFRQ9UKV5 643 aa26.1■■□□□ 1.77
SMC4-206ENST00000465903 HS3ST3A1Q9Y663 406 aa26.1■■□□□ 1.77
SMC4-206ENST00000465903 CAPN6Q9Y6Q1 641 aa26.1■■□□□ 1.77
SMC4-206ENST00000465903 CACNA1AO00555 2505 aa26.09■■□□□ 1.77
SMC4-206ENST00000465903 SOCS5O75159 536 aa26.09■■□□□ 1.77
SMC4-206ENST00000465903 JCHAINP01591 159 aa26.09■■□□□ 1.77
SMC4-206ENST00000465903 TGM2P21980 687 aa26.09■■□□□ 1.77
SMC4-206ENST00000465903 AKT2P31751 481 aa26.09■■□□□ 1.77
SMC4-206ENST00000465903 NR2C2P49116 596 aa26.09■■□□□ 1.77
SMC4-206ENST00000465903 COPS2P61201 443 aa26.09■■□□□ 1.77
SMC4-206ENST00000465903 NIPAL4Q0D2K0 466 aa26.09■■□□□ 1.77
SMC4-206ENST00000465903 AP1B1Q10567 949 aa26.09■■□□□ 1.77
SMC4-206ENST00000465903 PRAMEF14Q5SWL7 426 aa26.09■■□□□ 1.77
SMC4-206ENST00000465903 RNF10Q8N5U6 811 aaKnown RBP26.09■■□□□ 1.77
SMC4-206ENST00000465903 CXorf40AQ8TE69 158 aa26.09■■□□□ 1.77
SMC4-206ENST00000465903 SKA1Q96BD8 255 aa26.09■■□□□ 1.77
SMC4-206ENST00000465903 WRAP53Q9BUR4 548 aaKnown RBP26.09■■□□□ 1.77
SMC4-206ENST00000465903 HEMGNQ9BXL5 484 aa26.09■■□□□ 1.77
SMC4-206ENST00000465903 TM7SF2O76062 418 aa26.08■■□□□ 1.77
SMC4-206ENST00000465903 ZNF883P0CG24 379 aa26.08■■□□□ 1.77
SMC4-206ENST00000465903 MMP12P39900 470 aa26.08■■□□□ 1.77
SMC4-206ENST00000465903 RWDD2BP57060 319 aa26.08■■□□□ 1.77
SMC4-206ENST00000465903 POLR2LP62875 67 aaKnown RBP26.08■■□□□ 1.77
SMC4-206ENST00000465903 OVGP1Q12889 678 aa26.08■■□□□ 1.77
SMC4-206ENST00000465903 RALGDSQ12967 914 aa26.08■■□□□ 1.77
SMC4-206ENST00000465903 SGCGQ13326 291 aa26.08■■□□□ 1.77
SMC4-206ENST00000465903 SLC14A1Q13336 389 aa26.08■■□□□ 1.77
SMC4-206ENST00000465903 AADACL2Q6P093 401 aa26.08■■□□□ 1.77
SMC4-206ENST00000465903 BBS12Q6ZW61 710 aa26.08■■□□□ 1.77
SMC4-206ENST00000465903 PEX26Q7Z412 305 aa26.08■■□□□ 1.77
SMC4-206ENST00000465903 ABI3BPQ7Z7G0 1075 aa26.08■■□□□ 1.77
SMC4-206ENST00000465903 PIP4P1Q86T03 277 aa26.08■■□□□ 1.77
SMC4-206ENST00000465903 SYCE1Q8N0S2 351 aa26.08■■□□□ 1.77
SMC4-206ENST00000465903 KLHDC7BQ96G42 594 aa26.08■■□□□ 1.77
SMC4-206ENST00000465903 BRD8Q9H0E9 1235 aa26.08■■□□□ 1.77
SMC4-206ENST00000465903 TM7SF3Q9NS93 570 aa26.08■■□□□ 1.77
SMC4-206ENST00000465903 POM121BA6NF01 834 aa26.07■■□□□ 1.76
SMC4-206ENST00000465903 PPP1R12AO14974 1030 aaPredicted RBP26.07■■□□□ 1.76
SMC4-206ENST00000465903 DDX3YO15523 660 aaKnown RBP26.07■■□□□ 1.76
SMC4-206ENST00000465903 FZD6O60353 706 aa26.07■■□□□ 1.76
SMC4-206ENST00000465903 FTCDO95954 541 aa26.07■■□□□ 1.76
SMC4-206ENST00000465903 CES1P23141 567 aa26.07■■□□□ 1.76
SMC4-206ENST00000465903 PRKD1Q15139 912 aaPredicted RBP26.07■■□□□ 1.76
SMC4-206ENST00000465903 ERAP2Q6P179 960 aa26.07■■□□□ 1.76
SMC4-206ENST00000465903 DBX2Q6ZNG2 339 aa26.07■■□□□ 1.76
SMC4-206ENST00000465903 BZW1Q7L1Q6 419 aaKnown RBP26.07■■□□□ 1.76
SMC4-206ENST00000465903 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.07■■□□□ 1.76
SMC4-206ENST00000465903 CENPTQ96BT3 561 aa26.07■■□□□ 1.76
SMC4-206ENST00000465903 CEP41Q9BYV8 373 aa26.07■■□□□ 1.76
SMC4-206ENST00000465903 PHTF1Q9UMS5 762 aa26.07■■□□□ 1.76
SMC4-206ENST00000465903 PACSIN2Q9UNF0 486 aaPredicted RBP26.07■■□□□ 1.76
SMC4-206ENST00000465903 COQ6Q9Y2Z9 468 aa26.07■■□□□ 1.76
SMC4-206ENST00000465903 PCDHB9Q9Y5E1 797 aa26.07■■□□□ 1.76
SMC4-206ENST00000465903 RAI2Q9Y5P3 530 aa26.07■■□□□ 1.76
SMC4-206ENST00000465903 ARID1BQ8NFD5 2236 aaPredicted RBP26.07■■□□□ 1.76
SMC4-206ENST00000465903 A0A1B0GTQ1 180 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 A0A1W2PQ67 120 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 PGLSO95336 258 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 MMP2P08253 660 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 PDHA1P08559 390 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 PYGMP11217 842 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 CSRP1P21291 193 aaKnown RBP26.06■■□□□ 1.76
SMC4-206ENST00000465903 PTPN7P35236 360 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 LIG3P49916 1009 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 FAM193AP78312 1265 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 SHBQ15464 509 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 DPPA4Q7L190 304 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 OR13H1Q8NG92 308 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 PDCD6IPQ8WUM4 868 aaKnown RBP26.06■■□□□ 1.76
SMC4-206ENST00000465903 PIH1D2Q8WWB5 315 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 P3H4Q92791 437 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 ELF4Q99607 663 aaPredicted RBP26.06■■□□□ 1.76
SMC4-206ENST00000465903 OSBPL8Q9BZF1 889 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 TSGA10Q9BZW7 698 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 ERVMER34-1Q9H9K5 563 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 GDF3Q9NR23 364 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 GUCA1BQ9UMX6 200 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 EFR3BQ9Y2G0 817 aa26.06■■□□□ 1.76
SMC4-206ENST00000465903 MAGEC1O60732 1142 aa26.05■■□□□ 1.76
SMC4-206ENST00000465903 KCNK5O95279 499 aa26.05■■□□□ 1.76
SMC4-206ENST00000465903 THEGLP0DJG4 465 aa26.05■■□□□ 1.76
SMC4-206ENST00000465903 C6P13671 934 aa26.05■■□□□ 1.76
SMC4-206ENST00000465903 LIPIQ6XZB0 460 aa26.05■■□□□ 1.76
SMC4-206ENST00000465903 KDM7AQ6ZMT4 941 aa26.05■■□□□ 1.76
SMC4-206ENST00000465903 ZNF662Q6ZS27 426 aa26.05■■□□□ 1.76
SMC4-206ENST00000465903 TP53I13Q8NBR0 393 aaPredicted RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms