RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 NEMFO60524 1076 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 TBCAO75347 108 aaKnown RBP3.21□□□□□ -1.9
CD55-207ENST00000465534 ATP6V1G1O75348 118 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 THP07101 528 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 IVLP07476 585 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 CREB1P16220 341 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 KLRK1P26718 216 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 PRKAR1BP31321 381 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 DIO1P49895 249 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 PEX5P50542 639 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 PSMD7P51665 324 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 PGGT1BP53609 377 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 UBASH3AP57075 661 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 SLC8A3P57103 927 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 BPIFB3P59826 476 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 B4GALNT1Q00973 533 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 AMPD3Q01432 767 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 ZBTB17Q13105 803 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 GPS2Q13227 327 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 PLS1Q14651 629 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 COG2Q14746 738 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 SLMAPQ14BN4 828 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 PFKFB3Q16875 520 aaPredicted RBP3.21□□□□□ -1.9
CD55-207ENST00000465534 FAM110CQ1W6H9 321 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 TMEM95Q3KNT9 176 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 ZIK1Q3SY52 487 aaPredicted RBP3.21□□□□□ -1.9
CD55-207ENST00000465534 SH2D4BQ5SQS7 431 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 TEX35Q5T0J7 233 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 C10orf76Q5T2E6 689 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 C10orf62Q5T681 223 aaPredicted RBP3.21□□□□□ -1.9
CD55-207ENST00000465534 CYP26C1Q6V0L0 522 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 GBP6Q6ZN66 633 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 BEND5Q7L4P6 421 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 MFN1Q8IWA4 741 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 SPARTQ8N0X7 666 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 ESX1Q8N693 406 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 PARD3BQ8TEW8 1205 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 TMEM255BQ8WV15 326 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 ZFAND2BQ8WV99 257 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 ATP2A3Q93084 1043 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 HPS3Q969F9 1004 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 TBC1D31Q96DN5 1066 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 SAAL1Q96ER3 474 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 SLC35A4Q96G79 324 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 EIF3CQ99613 913 aaKnown RBP3.21□□□□□ -1.9
CD55-207ENST00000465534 MESP1Q9BRJ9 268 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 CENPOQ9BU64 300 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 FAM126AQ9BYI3 521 aaPredicted RBP3.21□□□□□ -1.9
CD55-207ENST00000465534 TNMDQ9H2S6 317 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 RABEP2Q9H5N1 569 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 PRKRIP1Q9H875 184 aaPredicted RBP3.21□□□□□ -1.9
CD55-207ENST00000465534 KIF9Q9HAQ2 790 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 DECR2Q9NUI1 292 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 IL20Q9NYY1 176 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 ZNF69Q9UC07 566 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 ERRFI1Q9UJM3 462 aaPredicted RBP3.21□□□□□ -1.9
CD55-207ENST00000465534 DRG1Q9Y295 367 aaKnown RBP3.21□□□□□ -1.9
CD55-207ENST00000465534 PCDHGB3Q9Y5G1 929 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 PCLOQ9Y6V0 5065 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 MYO16Q9Y6X6 1858 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 TRIP12Q14669 1992 aaPredicted RBP3.2□□□□□ -1.9
CD55-207ENST00000465534 MAPK8IP3Q9UPT6 1336 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 DAPK1P53355 1430 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 VPS8Q8N3P4 1428 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 SIP14410 1827 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 A0A1B0GUA9 196 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 CLIC1O00299 241 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 ATP8B1O43520 1251 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 ZC3H11AO75152 810 aaKnown RBP eCLIP3.2□□□□□ -1.9
CD55-207ENST00000465534 SFTPCP11686 197 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 GPTP24298 496 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 HNRNPH1P31943 449 aaKnown RBP3.2□□□□□ -1.9
CD55-207ENST00000465534 KIF5BP33176 963 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 CASP2P42575 452 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 RANBP1P43487 201 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 ALDH7A1P49419 539 aaKnown RBP3.2□□□□□ -1.9
CD55-207ENST00000465534 MTHFSP49914 203 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 TUBA1BP68363 451 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 PHEXP78562 749 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 PPIDQ08752 370 aaKnown RBP3.2□□□□□ -1.9
CD55-207ENST00000465534 ITKQ08881 620 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 NCBP1Q09161 790 aaKnown RBP3.2□□□□□ -1.9
CD55-207ENST00000465534 CCNIQ14094 377 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 NFATC4Q14934 902 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 ZRSR1Q15695 479 aaKnown RBP3.2□□□□□ -1.9
CD55-207ENST00000465534 SHROOM1Q2M3G4 852 aaPredicted RBP3.2□□□□□ -1.9
CD55-207ENST00000465534 SLC10A5Q5PT55 438 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 CERCAMQ5T4B2 595 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 CFAP58Q5T655 872 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 WLSQ5T9L3 541 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 DCAF12L1Q5VU92 463 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 LMBRD2Q68DH5 695 aaPredicted RBP3.2□□□□□ -1.9
CD55-207ENST00000465534 ISM2Q6H9L7 571 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 ZNF449Q6P9G9 518 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 TUBA1AQ71U36 451 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 ARHGAP22Q7Z5H3 698 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.2□□□□□ -1.9
CD55-207ENST00000465534 CUZD1Q86UP6 607 aa3.2□□□□□ -1.9
CD55-207ENST00000465534 DZIP1Q86YF9 867 aaKnown RBP3.2□□□□□ -1.9
CD55-207ENST00000465534 ERC1Q8IUD2 1116 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms