RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 NPNTQ6UXI9 565 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 LINGO4Q6UY18 593 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 C4orf22Q6V702 233 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 GANCQ8TET4 914 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 GRK7Q8WTQ7 553 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 HTR3CQ8WXA8 447 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 OR8D1Q8WZ84 308 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 MAML1Q92585 1016 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 PSKH2Q96QS6 385 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 LGMNQ99538 433 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 POLR1EQ9GZS1 481 aaKnown RBP17.64■□□□□ 0.41
CPSF4-209ENST00000465132 FBXL12Q9NXK8 326 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 SAE1Q9UBE0 346 aaPredicted RBP17.64■□□□□ 0.41
CPSF4-209ENST00000465132 ZNF148Q9UQR1 794 aa17.64■□□□□ 0.41
CPSF4-209ENST00000465132 DRG1Q9Y295 367 aaKnown RBP17.64■□□□□ 0.41
CPSF4-209ENST00000465132 ANKRD11Q6UB99 2663 aaPredicted RBP17.63■□□□□ 0.41
CPSF4-209ENST00000465132 FAM47DPA6NHR8 397 aa17.63■□□□□ 0.41
CPSF4-209ENST00000465132 CCDC188H7C350 402 aa17.63■□□□□ 0.41
CPSF4-209ENST00000465132 ZNF500O60304 480 aaPredicted RBP17.63■□□□□ 0.41
CPSF4-209ENST00000465132 TMCC1O94876 653 aa17.63■□□□□ 0.41
CPSF4-209ENST00000465132 POP4O95707 220 aaKnown RBP17.63■□□□□ 0.41
CPSF4-209ENST00000465132 GLDCP23378 1020 aa17.63■□□□□ 0.41
CPSF4-209ENST00000465132 CTSOP43234 321 aaPredicted RBP17.63■□□□□ 0.41
CPSF4-209ENST00000465132 STK19P49842 368 aaPredicted RBP17.63■□□□□ 0.41
CPSF4-209ENST00000465132 RACK1P63244 317 aaKnown RBP17.63■□□□□ 0.41
CPSF4-209ENST00000465132 CST6Q15828 149 aa17.63■□□□□ 0.41
CPSF4-209ENST00000465132 CARD16Q5EG05 197 aa17.63■□□□□ 0.41
CPSF4-209ENST00000465132 C9orf64Q5T6V5 341 aa17.63■□□□□ 0.41
CPSF4-209ENST00000465132 FAM46CQ5VWP2 391 aa17.63■□□□□ 0.41
CPSF4-209ENST00000465132 ADAT2Q7Z6V5 191 aaKnown RBP17.63■□□□□ 0.41
CPSF4-209ENST00000465132 TEX26Q8N6G2 289 aa17.63■□□□□ 0.41
CPSF4-209ENST00000465132 MNS1Q8NEH6 495 aa17.63■□□□□ 0.41
CPSF4-209ENST00000465132 OR2AP1Q8NGE2 309 aa17.63■□□□□ 0.41
CPSF4-209ENST00000465132 COG1Q8WTW3 980 aa17.63■□□□□ 0.41
CPSF4-209ENST00000465132 RBM22Q9NW64 420 aaKnown RBP eCLIP17.63■□□□□ 0.41
CPSF4-209ENST00000465132 SERGEFQ9UGK8 458 aa17.63■□□□□ 0.41
CPSF4-209ENST00000465132 SLCO3A1Q9UIG8 710 aa17.63■□□□□ 0.41
CPSF4-209ENST00000465132 FREM2Q5SZK8 3169 aa17.63■□□□□ 0.41
CPSF4-209ENST00000465132 KNL1Q8NG31 2342 aa17.63■□□□□ 0.41
CPSF4-209ENST00000465132 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.62■□□□□ 0.41
CPSF4-209ENST00000465132 A0A1W2PP55 124 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 A0A1W2PPC4 97 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 A0A1W2PQ67 120 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 GOLGA6CA6NDK9 693 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 GOLGA6BA6NDN3 693 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 VILLO15195 856 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 MID1O15344 667 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 LIASO43766 372 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 DFNA5O60443 496 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 URI1O94763 535 aaPredicted RBP17.62■□□□□ 0.41
CPSF4-209ENST00000465132 PRNPP04156 253 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 ITGAVP06756 1048 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 GOLGA6DP0CG33 693 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 NFKBIAP25963 317 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 TNNT3P45378 269 aaPredicted RBP17.62■□□□□ 0.41
CPSF4-209ENST00000465132 AP1S1P61966 158 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 TEX44Q53QW1 395 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 DNTTIP2Q5QJE6 756 aaKnown RBP17.62■□□□□ 0.41
CPSF4-209ENST00000465132 NCEH1Q6PIU2 408 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 GSTA5Q7RTV2 222 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 MARCH9Q86YJ5 346 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 GALNT15Q8N3T1 639 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 RYBPQ8N488 228 aaPredicted RBP17.62■□□□□ 0.41
CPSF4-209ENST00000465132 SLC35B2Q8TB61 432 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 PPP1R16AQ96I34 528 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 SLC6A18Q96N87 628 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 TUBGCP5Q96RT8 1024 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 OSBPL1AQ9BXW6 950 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 GOLGA6AQ9NYA3 693 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 SEPT10Q9P0V9 454 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 DKK4Q9UBT3 224 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 RAXQ9Y2V3 346 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 DSPP15924 2871 aaKnown RBP17.62■□□□□ 0.41
CPSF4-209ENST00000465132 PTPRBP23467 1997 aa17.62■□□□□ 0.41
CPSF4-209ENST00000465132 TTC34A8MYJ7 566 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 C10orf142B7Z368 130 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 C1QTNF3-AMACRE9PGA6 284 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 RNASEH2AO75792 299 aaKnown RBP17.61■□□□□ 0.41
CPSF4-209ENST00000465132 MAP3K6O95382 1288 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 MT-CO1P00395 513 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 CHRNA3P32297 505 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 FNTAP49354 379 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 C21orf59P57076 290 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 IL9RQ01113 521 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 ITKQ08881 620 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 SLC10A7Q0GE19 358 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 WHAMMP3Q1A5X7 153 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 COL28A1Q2UY09 1125 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 ARHGAP36Q6ZRI8 547 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 CREG2Q8IUH2 290 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 MMAAQ8IVH4 418 aaKnown RBP17.61■□□□□ 0.41
CPSF4-209ENST00000465132 CCDC89Q8N998 374 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 OR2T34Q8NGX1 318 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 ATL2Q8NHH9 583 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 FRS2Q8WU20 508 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 MAGOHBQ96A72 148 aaKnown RBP17.61■□□□□ 0.41
CPSF4-209ENST00000465132 CAPZA3Q96KX2 299 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 IL12RB2Q99665 862 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 OMDQ99983 421 aa17.61■□□□□ 0.41
CPSF4-209ENST00000465132 HEPHQ9BQS7 1158 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms