RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 EFNA5P52803 228 aa6.1□□□□□ -1.43
PTCD3-205ENST00000464541 EIF3BP55884 814 aaKnown RBP6.1□□□□□ -1.43
PTCD3-205ENST00000464541 POU5F1BQ06416 359 aa6.1□□□□□ -1.43
PTCD3-205ENST00000464541 TCTN1Q2MV58 587 aa6.1□□□□□ -1.43
PTCD3-205ENST00000464541 SLC9B1Q4ZJI4 515 aa6.1□□□□□ -1.43
PTCD3-205ENST00000464541 PPP6R3Q5H9R7 873 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-205ENST00000464541 JAKMIP3Q5VZ66 844 aa6.1□□□□□ -1.43
PTCD3-205ENST00000464541 TYW3Q6IPR3 259 aaKnown RBP6.1□□□□□ -1.43
PTCD3-205ENST00000464541 H1FNTQ75WM6 255 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-205ENST00000464541 FJX1Q86VR8 437 aa6.1□□□□□ -1.43
PTCD3-205ENST00000464541 SCCPDHQ8NBX0 429 aa6.1□□□□□ -1.43
PTCD3-205ENST00000464541 ARRDC2Q8TBH0 407 aa6.1□□□□□ -1.43
PTCD3-205ENST00000464541 RRP36Q96EU6 259 aaKnown RBP6.1□□□□□ -1.43
PTCD3-205ENST00000464541 MED30Q96HR3 178 aa6.1□□□□□ -1.43
PTCD3-205ENST00000464541 NR1H4Q96RI1 486 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-205ENST00000464541 BBS4Q96RK4 519 aa6.1□□□□□ -1.43
PTCD3-205ENST00000464541 KRTAP9-8Q9BYQ0 159 aa6.1□□□□□ -1.43
PTCD3-205ENST00000464541 TM6SF1Q9BZW5 370 aa6.1□□□□□ -1.43
PTCD3-205ENST00000464541 TAS2R10Q9NYW0 307 aa6.1□□□□□ -1.43
PTCD3-205ENST00000464541 UTYO14607 1347 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 KDM3AQ9Y4C1 1321 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 TIMM23O14925 209 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 GAGE7O76087 117 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 CH25HO95992 272 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 MMP2P08253 660 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 GAGE12FP0CL80 117 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 GAGE12GP0CL81 117 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 GAGE12IP0CL82 117 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 ETFAP13804 333 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 CPOXP36551 454 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 RAD23BP54727 409 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 GAGE1Q13065 139 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 GAGE4Q13068 117 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 KEAP1Q14145 624 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 NEDD9Q14511 834 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 PPP2R5BQ15173 497 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 KIAA1161Q6NSJ0 714 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 SHFQ7M4L6 423 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 NEXN-AS1Q8NBZ9 246 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 BEST2Q8NFU1 509 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 ZUFSPQ96AP4 578 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 HEMGNQ9BXL5 484 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 NUF2Q9BZD4 464 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 PLEKHA4Q9H4M7 779 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 SCINQ9Y6U3 715 aa6.09□□□□□ -1.43
PTCD3-205ENST00000464541 NPIPB11E5RHQ5 1161 aa6.08□□□□□ -1.44
PTCD3-205ENST00000464541 EIF5BO60841 1220 aaKnown RBP6.08□□□□□ -1.44
PTCD3-205ENST00000464541 EPHA8P29322 1005 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-205ENST00000464541 ELF1P32519 619 aa6.08□□□□□ -1.44
PTCD3-205ENST00000464541 DSCR9P59020 149 aa6.08□□□□□ -1.44
PTCD3-205ENST00000464541 NEXNQ0ZGT2 675 aa6.08□□□□□ -1.44
PTCD3-205ENST00000464541 GSTA3Q16772 222 aa6.08□□□□□ -1.44
PTCD3-205ENST00000464541 CRELD2Q6UXH1 353 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-205ENST00000464541 LINGO2Q7L985 606 aa6.08□□□□□ -1.44
PTCD3-205ENST00000464541 SLC46A3Q7Z3Q1 461 aa6.08□□□□□ -1.44
PTCD3-205ENST00000464541 PCYOX1LQ8NBM8 494 aa6.08□□□□□ -1.44
PTCD3-205ENST00000464541 AGBL3Q8NEM8 1001 aa6.08□□□□□ -1.44
PTCD3-205ENST00000464541 SLITRK1Q96PX8 696 aa6.08□□□□□ -1.44
PTCD3-205ENST00000464541 PRKRIP1Q9H875 184 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-205ENST00000464541 BPIFA1Q9NP55 256 aa6.08□□□□□ -1.44
PTCD3-205ENST00000464541 IGLV5-52A0A0A0MRZ9 124 aa6.07□□□□□ -1.44
PTCD3-205ENST00000464541 LRRC53A6NM62 1247 aa6.07□□□□□ -1.44
PTCD3-205ENST00000464541 USP17L23D6RBM5 183 aa6.07□□□□□ -1.44
PTCD3-205ENST00000464541 LDLRAD4O15165 306 aa6.07□□□□□ -1.44
PTCD3-205ENST00000464541 EDN2P20800 178 aa6.07□□□□□ -1.44
PTCD3-205ENST00000464541 LRRC8EQ6NSJ5 796 aa6.07□□□□□ -1.44
PTCD3-205ENST00000464541 DHX40Q8IX18 779 aaKnown RBP6.07□□□□□ -1.44
PTCD3-205ENST00000464541 ZCCHC9Q8N567 271 aaKnown RBP6.07□□□□□ -1.44
PTCD3-205ENST00000464541 RFFLQ8WZ73 363 aa6.07□□□□□ -1.44
PTCD3-205ENST00000464541 SLC25A18Q9H1K4 315 aa6.07□□□□□ -1.44
PTCD3-205ENST00000464541 MAGEE1Q9HCI5 957 aa6.07□□□□□ -1.44
PTCD3-205ENST00000464541 CISD1Q9NZ45 108 aaKnown RBP6.07□□□□□ -1.44
PTCD3-205ENST00000464541 CTNNAL1Q9UBT7 734 aa6.07□□□□□ -1.44
PTCD3-205ENST00000464541 ZNF69Q9UC07 566 aa6.07□□□□□ -1.44
PTCD3-205ENST00000464541 LINC01553A4QN01 128 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 C4orf47A7E2U8 309 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 J3KR12 359 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 ACOT8O14734 319 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 HSPA12AO43301 675 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 TMEM63AO94886 807 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 TGFB3P10600 412 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 FGF3P11487 239 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-205ENST00000464541 HOXB6P17509 224 aaKnown RBP6.06□□□□□ -1.44
PTCD3-205ENST00000464541 DDX5P17844 614 aaKnown RBP6.06□□□□□ -1.44
PTCD3-205ENST00000464541 TNFRSF8P28908 595 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 CCKBRP32239 447 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 CDAP32320 146 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 KRT9P35527 623 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 CTCFP49711 727 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-205ENST00000464541 CASP6P55212 293 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 KIF5AQ12840 1032 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 GRIK3Q13003 919 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 TRAF3Q13114 568 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 SGO1Q5FBB7 561 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 NADSYN1Q6IA69 706 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 CREB3L2Q70SY1 520 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 CERS3Q8IU89 383 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 CADM4Q8NFZ8 388 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 NUDCD2Q8WVJ2 157 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 ZNF570Q96NI8 536 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms