RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 PHTF1Q9UMS5 762 aa14.62□□□□□ -0.07
SQSTM1-205ENST00000464493 PCDHB9Q9Y5E1 797 aa14.62□□□□□ -0.07
SQSTM1-205ENST00000464493 LNP1A1A4G5 178 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 IGLON5A6NGN9 336 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 PRAMEF26H0Y7S4 382 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 MMP20O60882 483 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 PGLSO95336 258 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 PAK4O96013 591 aaPredicted RBP14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 PRKCGP05129 697 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 SYPP08247 313 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 RBP3P10745 1247 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 CA4P22748 312 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 RBL1P28749 1068 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 CSNK1EP49674 416 aaKnown RBP14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 FAM193AP78312 1265 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 LMNB2Q03252 620 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 SGCGQ13326 291 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 TEAD4Q15561 434 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 NAPEPLDQ6IQ20 393 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 DARS2Q6PI48 645 aaKnown RBP14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 IMP4Q96G21 291 aaKnown RBP14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 SLC6A18Q96N87 628 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 VAT1Q99536 393 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 FAM118BQ9BPY3 351 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 FERMT1Q9BQL6 677 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 TLR10Q9BXR5 811 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 SLC25A51Q9H1U9 297 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 C10orf88Q9H8K7 445 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 GLOD4Q9HC38 313 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 AASDHPPTQ9NRN7 309 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 RXFP3Q9NSD7 469 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 JRKLQ9Y4A0 524 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 CACNA1EQ15878 2313 aa14.61□□□□□ -0.07
SQSTM1-205ENST00000464493 TCRBV7S2A1N4TA0A589 114 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 ARHGAP33O14559 1287 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 WNT9AO14904 365 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 FZD6O60353 706 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 CPP00450 1065 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 MMP2P08253 660 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 PDHA1P08559 390 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 PRLRP16471 622 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 ENGP17813 658 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 HNRNPA2B1P22626 353 aaKnown RBP14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 NFKBIAP25963 317 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 CD38P28907 300 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 AKT2P31751 481 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 MMP12P39900 470 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 CD86P42081 329 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 GRIA4P48058 902 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 SKOR1P84550 965 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 ARHGAP8P85298 464 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 SEMG2Q02383 582 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 FGL2Q14314 439 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 STAT4Q14765 748 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 ZNF569Q5MCW4 686 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 PID1Q7Z2X4 250 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 ADAT2Q7Z6V5 191 aaKnown RBP14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 SLC13A5Q86YT5 568 aaPredicted RBP14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 CDKL3Q8IVW4 592 aaPredicted RBP14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 NDUFAF2Q8N183 169 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 PIH1D2Q8WWB5 315 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 ASB12Q8WXK4 309 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 SKA1Q96BD8 255 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 RBM15Q96T37 977 aaKnown RBP eCLIP14.6□□□□□ -0.071e-7■■□□□ 13.5
SQSTM1-205ENST00000464493 WRAP53Q9BUR4 548 aaKnown RBP14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 C1QTNF2Q9BXJ5 285 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 ZDHHC5Q9C0B5 715 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 FSCN3Q9NQT6 498 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 KLHL8Q9P2G9 620 aaPredicted RBP14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 TRHDEQ9UKU6 1024 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 PYCARDQ9ULZ3 195 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 CHKBQ9Y259 395 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 ADAMTS9Q9P2N4 1935 aa14.6□□□□□ -0.07
SQSTM1-205ENST00000464493 A0A1B0GVT2 93 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 CFAP69A5D8W1 941 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 ENC1O14682 589 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 VILLO15195 856 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 KIF5CO60282 957 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 GDF9O60383 454 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 TM7SF2O76062 418 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 MSNP26038 577 aaKnown RBP14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 CD68P34810 354 aaPredicted RBP14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 LIG3P49916 1009 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 ATXN3P54252 364 aaPredicted RBP14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 GRIK2Q13002 908 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 ZNF567Q8N184 647 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 TMEM145Q8NBT3 493 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 SCRN2Q96FV2 425 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 LENG8Q96PV6 779 aaPredicted RBP14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 MYOCQ99972 504 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 EDEM2Q9BV94 578 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 TDRD1Q9BXT4 1180 aaKnown RBP14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 PCDH9Q9HC56 1237 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 FZD3Q9NPG1 666 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 ANKRD6Q9Y2G4 727 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 R3HDM2Q9Y2K5 976 aaKnown RBP14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 PPIL1Q9Y3C6 166 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 KNL1Q8NG31 2342 aa14.59□□□□□ -0.07
SQSTM1-205ENST00000464493 DMXL1Q9Y485 3027 aa14.58□□□□□ -0.07
SQSTM1-205ENST00000464493 DNAH14Q0VDD8 3507 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms