RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 PCDHB1Q9Y5F3 818 aa19■□□□□ 0.63
SF3A1-205ENST00000463818 BZW2Q9Y6E2 419 aaKnown RBP19■□□□□ 0.63
SF3A1-205ENST00000463818 H3BRJ5 948 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 MUSKO15146 869 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 YY2O15391 372 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 BRINP1O60477 761 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 ANXA6P08133 673 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 TCF4P15884 667 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 AMPD1P23109 780 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 PBX1P40424 430 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 EIF2S3P41091 472 aaKnown RBP18.99■□□□□ 0.63
SF3A1-205ENST00000463818 SCNN1BP51168 640 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 RENBPP51606 427 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 UBASH3AP57075 661 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 TPM4P67936 248 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 BCL2L1Q07817 233 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 INPP5AQ14642 412 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 EFL1Q7Z2Z2 1120 aaKnown RBP18.99■□□□□ 0.63
SF3A1-205ENST00000463818 POLNQ7Z5Q5 900 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 CPLX3Q8WVH0 158 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 SYN2Q92777 582 aaPredicted RBP18.99■□□□□ 0.63
SF3A1-205ENST00000463818 FGF11Q92914 225 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 TBATAQ96M53 351 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 NSMCE3Q96MG7 304 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 DEPDC7Q96QD5 511 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 APOOQ9BUR5 198 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 LRRC61Q9BV99 259 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 CLPBQ9H078 707 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 ETNK2Q9NVF9 386 aa18.99■□□□□ 0.63
SF3A1-205ENST00000463818 ADAMTS20P59510 1910 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 A0A1W2PQJ5 194 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 EME2A4GXA9 379 aaPredicted RBP18.98■□□□□ 0.63
SF3A1-205ENST00000463818 LMO7DNF2Z398 122 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 TSHRP16473 764 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 ITPKBP27987 946 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 MMP12P39900 470 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 ARL4AP40617 200 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 BLKP51451 505 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 LBRQ14739 615 aaKnown RBP18.98■□□□□ 0.63
SF3A1-205ENST00000463818 AGERQ15109 404 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 NR0B2Q15466 257 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 DPYSL2Q16555 572 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 SMTNL2Q2TAL5 461 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 GUSBP11Q6P575 273 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 ENPP7Q6UWV6 458 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 HID1Q8IV36 788 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 PAF1Q8N7H5 531 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 HSPH1Q92598 858 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 GLMNQ92990 594 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 TSACCQ96A04 125 aaPredicted RBP18.98■□□□□ 0.63
SF3A1-205ENST00000463818 ECHDC3Q96DC8 303 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 CRELD1Q96HD1 420 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 BOCQ9BWV1 1114 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 SEPT3Q9UH03 358 aa18.98■□□□□ 0.63
SF3A1-205ENST00000463818 TTC24A2A3L6 582 aaPredicted RBP18.97■□□□□ 0.63
SF3A1-205ENST00000463818 CFAP69A5D8W1 941 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 TRAFD1O14545 582 aaPredicted RBP18.97■□□□□ 0.63
SF3A1-205ENST00000463818 CSO75390 466 aaKnown RBP18.97■□□□□ 0.63
SF3A1-205ENST00000463818 SERPING1P05155 500 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 RARAP10276 462 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 TGM2P21980 687 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 ACTN2P35609 894 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 ABCG1P45844 678 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 RPIAP49247 311 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 HK3P52790 923 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 POLR2LP62875 67 aaKnown RBP18.97■□□□□ 0.63
SF3A1-205ENST00000463818 ZBED6P86452 979 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 SLC10A7Q0GE19 358 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 PIGHQ14442 188 aaPredicted RBP18.97■□□□□ 0.63
SF3A1-205ENST00000463818 TXNRD3NBQ6F5E7 133 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 LRRC69Q6ZNQ3 347 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 RD3Q7Z3Z2 195 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 SLC35F3Q8IY50 421 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 BTBD6Q96KE9 485 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 ZNF599Q96NL3 588 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 PSKH2Q96QS6 385 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 THAP2Q9H0W7 228 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 CAPN11Q9UMQ6 739 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 OR1A2Q9Y585 309 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 ASXL3Q9C0F0 2248 aa18.97■□□□□ 0.63
SF3A1-205ENST00000463818 RRP8O43159 456 aaKnown RBP18.96■□□□□ 0.63
SF3A1-205ENST00000463818 USP12O75317 370 aa18.96■□□□□ 0.63
SF3A1-205ENST00000463818 RECQL5O94762 991 aaPredicted RBP18.96■□□□□ 0.63
SF3A1-205ENST00000463818 PCCBP05166 539 aa18.96■□□□□ 0.63
SF3A1-205ENST00000463818 CELA2BP08218 269 aaPredicted RBP18.96■□□□□ 0.63
SF3A1-205ENST00000463818 CTSEP14091 401 aa18.96■□□□□ 0.63
SF3A1-205ENST00000463818 HTR1BP28222 390 aa18.96■□□□□ 0.63
SF3A1-205ENST00000463818 AP1S1P61966 158 aa18.96■□□□□ 0.63
SF3A1-205ENST00000463818 RALGDSQ12967 914 aa18.96■□□□□ 0.63
SF3A1-205ENST00000463818 NFATC4Q14934 902 aa18.96■□□□□ 0.63
SF3A1-205ENST00000463818 NFKBIBQ15653 356 aa18.96■□□□□ 0.63
SF3A1-205ENST00000463818 ALG11Q2TAA5 492 aa18.96■□□□□ 0.63
SF3A1-205ENST00000463818 PERM1Q5SV97 790 aa18.96■□□□□ 0.63
SF3A1-205ENST00000463818 C6orf132Q5T0Z8 1188 aa18.96■□□□□ 0.63
SF3A1-205ENST00000463818 TMCO4Q5TGY1 634 aa18.96■□□□□ 0.63
SF3A1-205ENST00000463818 CRTC1Q6UUV9 634 aa18.96■□□□□ 0.63
SF3A1-205ENST00000463818 TMCO3Q6UWJ1 677 aa18.96■□□□□ 0.63
SF3A1-205ENST00000463818 LIPIQ6XZB0 460 aa18.96■□□□□ 0.63
SF3A1-205ENST00000463818 NYAP1Q6ZVC0 841 aa18.96■□□□□ 0.63
SF3A1-205ENST00000463818 FSTL5Q8N475 847 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms