RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 MCL1Q07820 350 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 MGAT2Q10469 447 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 PRPF4BQ13523 1007 aaKnown RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 TFDP1Q14186 410 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 PPP2R5AQ15172 486 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 MAPK6Q16659 721 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 SLC5A9Q2M3M2 681 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 CBWD6Q4V339 395 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 PABPC1LQ4VXU2 614 aaKnown RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 CBWD3Q5JTY5 395 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 FAM78AQ5JUQ0 283 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 GLRA4Q5JXX5 417 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 CBWD5Q5RIA9 395 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 LIN9Q5TKA1 542 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 ABHD17BQ5VST6 288 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 ARMCX5Q6P1M9 558 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 C1orf228Q6PIY5 440 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 CACNA2D4Q7Z3S7 1137 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 ZBTB8OSQ8IWT0 167 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 RHOT1Q8IXI2 618 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 DRC7Q8IY82 874 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 SYCP3Q8IZU3 236 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 CCDC51Q96ER9 411 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 BICD1Q96G01 975 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 ZMAT2Q96NC0 199 aaKnown RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 JPH2Q9BR39 696 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 FAM213AQ9BRX8 229 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 APOL6Q9BWW8 343 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 BRD9Q9H8M2 597 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 ZFP14Q9HCL3 533 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 PDE11AQ9HCR9 933 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 VPS45Q9NRW7 570 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 HCFC1R1Q9NWW0 138 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 C2orf42Q9NWW7 574 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 CPSF3Q9UKF6 684 aaKnown RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 ADAM28Q9UKQ2 775 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 NDRG2Q9UN36 371 aaKnown RBP3.83□□□□□ -1.8
SCFD1-204ENST00000463622 TNFSF13BQ9Y275 285 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 NEUROG3Q9Y4Z2 214 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 IPPQ9Y573 584 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 LOC400499M0QZD8 3231 aa3.83□□□□□ -1.8
SCFD1-204ENST00000463622 FREM2Q5SZK8 3169 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 HELZ2Q9BYK8 2649 aaKnown RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 CDHR4A6H8M9 788 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 KCNJ18B7U540 433 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 PTGESO14684 152 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 IKBKBO14920 756 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 ASAP2O43150 1006 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 MOSPD3O75425 235 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 TADA2AO75478 443 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 TOM1L1O75674 476 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 ENDOD1O94919 500 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 CLSTN1O94985 981 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 ZFPL1O95159 310 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 RHOP08100 348 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 PTPN2P17706 415 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 PSMC3P17980 439 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 DDCP20711 480 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 AGXTP21549 392 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 AXLP30530 894 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 NOVA1P51513 510 aaKnown RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 COPB1P53618 953 aaKnown RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 LRRC63Q05C16 580 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 FAPQ12884 760 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 MTM1Q13496 603 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 KCNJ12Q14500 433 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 NAB2Q15742 525 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 CCDC6Q16204 474 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 NFIL3Q16649 462 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 EDRF1Q3B7T1 1238 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 TCP11X2Q5H9J9 407 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 DGKKQ5KSL6 1271 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 RNF219Q5W0B1 726 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 PDXDC1Q6P996 788 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 GJB7Q6PEY0 223 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 VITQ6UXI7 678 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 KBTBD6Q86V97 674 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 ADGRG3Q86Y34 549 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 MFSD6LQ8IWD5 586 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 C12orf56Q8IXR9 622 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 CNTD1Q8N815 330 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 POMGNT1Q8WZA1 660 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 SEMA4DQ92854 862 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 KAT5Q92993 513 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 SLC35C1Q96A29 364 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 CCDC47Q96A33 483 aaKnown RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 C18orf25Q96B23 403 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 CCDC127Q96BQ5 260 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 HVCN1Q96D96 273 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 MSANTD3Q96H12 275 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 BBC3Q96PG8 261 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 PAAF1Q9BRP4 392 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 ANP32EQ9BTT0 268 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 MSTO1Q9BUK6 570 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 SCNM1Q9BWG6 230 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 XPO4Q9C0E2 1151 aaKnown RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 REXO4Q9GZR2 422 aaKnown RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 C2orf40Q9H1Z8 148 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 VPS16Q9H269 839 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms