RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 ARHGAP20Q9P2F6 1191 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 RNF14Q9UBS8 474 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 HESX1Q9UBX0 185 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 TEX264Q9Y6I9 313 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 DOCK1Q14185 1865 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 TARSL2A2RTX5 802 aaKnown RBP5.43□□□□□ -1.54
TRA2B-207ENST00000463328 GOLGA8IPA6NC78 632 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 AHRRA9YTQ3 701 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 J3QW42 95 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 AXIN1O15169 862 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 NKRFO15226 690 aaKnown RBP eCLIP5.43□□□□□ -1.54
TRA2B-207ENST00000463328 HTR3BO95264 441 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 HOXB1P14653 301 aaPredicted RBP5.43□□□□□ -1.54
TRA2B-207ENST00000463328 ACPPP15309 386 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 NME1P15531 152 aaKnown RBP5.43□□□□□ -1.54
TRA2B-207ENST00000463328 TUBG1P23258 451 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 AHCYP23526 432 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 PTPN4P29074 926 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 NUP62P37198 522 aaPredicted RBP5.43□□□□□ -1.54
TRA2B-207ENST00000463328 ACADSBP45954 432 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 MECP2P51608 486 aaKnown RBP5.43□□□□□ -1.54
TRA2B-207ENST00000463328 PSMD7P51665 324 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 CLCNKBP51801 687 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 BACE1P56817 501 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 FSTL1Q12841 308 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 DUSP4Q13115 394 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 ITGB3BPQ13352 177 aaPredicted RBP5.43□□□□□ -1.54
TRA2B-207ENST00000463328 MOGQ16653 247 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 USH1GQ495M9 461 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 RTP2Q5QGT7 225 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 ZBTB41Q5SVQ8 909 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 ATG16L1Q676U5 607 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 PLA2G4FQ68DD2 849 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 SRRM1Q8IYB3 904 aaKnown RBP5.43□□□□□ -1.54
TRA2B-207ENST00000463328 SPATA4Q8NEY3 305 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 RDM1Q8NG50 284 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 OR13C2Q8NGS9 318 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 THRSPQ92748 146 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 KAT2AQ92830 837 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 FBXO32Q969P5 355 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 KIAA1143Q96AT1 154 aaPredicted RBP5.43□□□□□ -1.54
TRA2B-207ENST00000463328 MIPEPQ99797 713 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 LBHD1Q9BQE6 289 aaPredicted RBP5.43□□□□□ -1.54
TRA2B-207ENST00000463328 REEP2Q9BRK0 252 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 COLEC11Q9BWP8 271 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 SLC5A7Q9GZV3 580 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 SLC25A18Q9H1K4 315 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 ABHD16BQ9H3Z7 469 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 AZI2Q9H6S1 392 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 SLC38A10Q9HBR0 1119 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 SAYSD1Q9NPB0 183 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 TUBG2Q9NRH3 451 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 TMEM184CQ9NVA4 438 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 DMAC2Q9NW81 257 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 ZNF446Q9NWS9 450 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 RGL1Q9NZL6 768 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 CFAP97Q9P2B7 532 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 MBD2Q9UBB5 411 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 B4GALT6Q9UBX8 382 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 ITGA11Q9UKX5 1188 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 LIPT1Q9Y234 373 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 MRPS2Q9Y399 296 aaKnown RBP5.43□□□□□ -1.54
TRA2B-207ENST00000463328 PCDHA13Q9Y5I0 950 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 GPR45Q9Y5Y3 372 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 UBIAD1Q9Y5Z9 338 aa5.43□□□□□ -1.54
TRA2B-207ENST00000463328 MYH11P35749 1972 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.42□□□□□ -1.54
TRA2B-207ENST00000463328 LOC100506127A0A0U1RQW1 187 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 A0A1W2PPW3 197 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 PODXLO00592 558 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 TNPO2O14787 897 aaKnown RBP5.42□□□□□ -1.54
TRA2B-207ENST00000463328 ATP2A1O14983 1001 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 PCDH8O95206 1070 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 ONECUT2O95948 504 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 KITP10721 976 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 GRNP28799 593 aaKnown RBP5.42□□□□□ -1.54
TRA2B-207ENST00000463328 CHRNA3P32297 505 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 HARS2P49590 506 aaKnown RBP5.42□□□□□ -1.54
TRA2B-207ENST00000463328 NPY4RP50391 375 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 CKAP4Q07065 602 aaKnown RBP5.42□□□□□ -1.54
TRA2B-207ENST00000463328 NIPAL4Q0D2K0 466 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 ZNF177Q13360 481 aaPredicted RBP5.42□□□□□ -1.54
TRA2B-207ENST00000463328 MED22Q15528 200 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 RAB30Q15771 203 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 C3orf36Q3SXR2 165 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 SLC9C1Q4G0N8 1177 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 NCAPH2Q6IBW4 605 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 SLC36A4Q6YBV0 504 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 BBS12Q6ZW61 710 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 USP50Q70EL3 339 aaPredicted RBP5.42□□□□□ -1.54
TRA2B-207ENST00000463328 VASH2Q86V25 355 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 CCDC105Q8IYK2 499 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 OR52E1Q8NGJ3 308 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 CLEC4DQ8WXI8 215 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 GFM2Q969S9 779 aaKnown RBP5.42□□□□□ -1.54
TRA2B-207ENST00000463328 NT5C3BQ969T7 300 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 ZNF653Q96CK0 615 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 OPTNQ96CV9 577 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 TMEM68Q96MH6 324 aa5.42□□□□□ -1.54
TRA2B-207ENST00000463328 RAD9AQ99638 391 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms