RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 MED15Q96RN5 788 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 METTL14Q9HCE5 456 aaKnown RBP7.8□□□□□ -1.16
SMC3-202ENST00000462899 LRRC4CQ9HCJ2 640 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 ZNF71Q9NQZ8 489 aaPredicted RBP7.8□□□□□ -1.16
SMC3-202ENST00000462899 PIGVQ9NUD9 493 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 RCOR1Q9UKL0 485 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 GPR34Q9UPC5 381 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 DGKBQ9Y6T7 804 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 HIVEP1P15822 2718 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 A0A1B0GVL5 298 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 ILVBLA1L0T0 632 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 ZNF891A8MT65 544 aaPredicted RBP7.79□□□□□ -1.16
SMC3-202ENST00000462899 M0QYT0 321 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 NUDT21O43809 227 aaKnown RBP7.79□□□□□ -1.16
SMC3-202ENST00000462899 DUX1O43812 170 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 HSF2BPO75031 334 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 DAB1O75553 588 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 KRT38O76015 456 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 ENDOD1O94919 500 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 RASGRP1O95267 797 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 TFE3P19532 575 aaPredicted RBP7.79□□□□□ -1.16
SMC3-202ENST00000462899 POU3F2P20265 443 aaPredicted RBP7.79□□□□□ -1.16
SMC3-202ENST00000462899 CMA1P23946 247 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 OAS2P29728 719 aaKnown RBP7.79□□□□□ -1.16
SMC3-202ENST00000462899 CXCR3P49682 368 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 ATP1A2P50993 1020 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 CDK17Q00537 523 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 SLC20A2Q08357 652 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 CDC20Q12834 499 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 NFATC4Q14934 902 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 ARHGAP44Q17R89 818 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 WSCD2Q2TBF2 565 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 C14orf28Q4W4Y0 310 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 CRTC2Q53ET0 693 aaPredicted RBP7.79□□□□□ -1.16
SMC3-202ENST00000462899 TCERG1LQ5VWI1 586 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 ERICH6BQ5W0A0 696 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 CAPRIN2Q6IMN6 1127 aaKnown RBP7.79□□□□□ -1.16
SMC3-202ENST00000462899 BNIPLQ7Z465 357 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 GKN2Q86XP6 184 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 PPM1KQ8N3J5 372 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 WDTC1Q8N5D0 677 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 BMPERQ8N8U9 685 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 SCG3Q8WXD2 468 aaKnown RBP7.79□□□□□ -1.16
SMC3-202ENST00000462899 TSACCQ96A04 125 aaPredicted RBP7.79□□□□□ -1.16
SMC3-202ENST00000462899 PGAP3Q96FM1 320 aaPredicted RBP7.79□□□□□ -1.16
SMC3-202ENST00000462899 ABHD17AQ96GS6 310 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 NT5C1BQ96P26 610 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 TAAR9Q96RI9 348 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 CPXM1Q96SM3 734 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 NPY6RQ99463 290 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 DDA1Q9BW61 102 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 ZDHHC6Q9H6R6 413 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 ACP6Q9NPH0 428 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 PGPEP1Q9NXJ5 209 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 MPP6Q9NZW5 540 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 HECAQ9UBI9 543 aaPredicted RBP7.79□□□□□ -1.16
SMC3-202ENST00000462899 NEU3Q9UQ49 428 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 GTF3C3Q9Y5Q9 886 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 SNX10Q9Y5X0 201 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 B3GALT1Q9Y5Z6 326 aa7.79□□□□□ -1.16
SMC3-202ENST00000462899 SYNJ2BP-COX16A0A087WUM0 186 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 IGHV5-10-1A0A0J9YXX1 117 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 PRR19A6NJB7 356 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 TMEM110-MUSTN1A8MSY1 372 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 K7EM74 188 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 AGRPO00253 132 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 NKX2-8O15522 239 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 B4GAT1O43505 415 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 MMP20O60882 483 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 TM7SF2O76062 418 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 CPNE6O95741 557 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 GSRP00390 522 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 NEFLP07196 543 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 ITIH2P19823 946 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 SRP54P61011 504 aaKnown RBP7.78□□□□□ -1.16
SMC3-202ENST00000462899 DHX9Q08211 1270 aaKnown RBP7.78□□□□□ -1.16
SMC3-202ENST00000462899 KLRB1Q12918 225 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 TCEA2Q15560 299 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 CLPPQ16740 277 aaPredicted RBP7.78□□□□□ -1.16
SMC3-202ENST00000462899 KLHL40Q2TBA0 621 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 TMEM52BQ4KMG9 183 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 LACTB2Q53H82 288 aaPredicted RBP7.78□□□□□ -1.16
SMC3-202ENST00000462899 LRRC73Q5JTD7 316 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 BRMS1LQ5PSV4 323 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 TMEM164Q5U3C3 297 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 ZNF787Q6DD87 383 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 ATL3Q6DD88 541 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 RETSATQ6NUM9 610 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 FOXR2Q6PJQ5 311 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 FAM183BPQ6ZVS7 135 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 RRAGAQ7L523 313 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 SLC26A9Q7LBE3 791 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 TFAP2DQ7Z6R9 452 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 HID1Q8IV36 788 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 Q8N9G6 341 aaPredicted RBP7.78□□□□□ -1.16
SMC3-202ENST00000462899 RCBTB1Q8NDN9 531 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 ZNF397Q8NF99 534 aaPredicted RBP7.78□□□□□ -1.16
SMC3-202ENST00000462899 OR2AP1Q8NGE2 309 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 OR6K2Q8NGY2 324 aa7.78□□□□□ -1.16
SMC3-202ENST00000462899 ZNF606Q8WXB4 792 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms